Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00602 ATGGAGAGCGCGTGGCAGAGGAAATGTGATTCGCCGTTTCAGCCGTCGACGTCTGCGACGGTTCCGTCTGCACTGTCGCCGGAGCAGGAGATGAATGCAAGCTATTGTCTTTACCCACAAGTTGCTCATGGTTTAAGATCAAAATTTGTTGGAGGGAAGCAGGGCCCTGTTTACCCAAGCTTTCCCCACTCAACTACCCATGGATCAGGCCAAGCCGATACTGGAAATTCATTTGTGGCTCTCCTTTATGGTCCTCCATCCTTGTTACAGAGTGAGTTTCAGGATTTGTCTGATCGCAAGCTTTGCATCTCATCTGGTGATTGTACTGCTGCTCTTGGAAATTCTGTTGTTGGTTCTATAGAAAGTGGAACCTTCCGAACATCTGGTGTGGGGTTGATAACAGAAAATTTAATTAACCGTAACCTGCAAAGTTGGGCGACCACTTTTCCTGAGATTTCTTCCAGGGCAATGGTTGGTCTGAATAATAGTAGTAATTTTGTCTTCCACGATATTCAGAGTAGCAATACTGCTATTCAGCCCACAATTCCTGGTGGTGAGAAAGCAAGGGAGTCTTTTTCTTCTCCAGGTCAGTGCCAAAGTACAAGCCCTGCATCTAGTCTAAATGTTTGCTGCTCAGATATTCAAACTACACCAACTGTTGCTTTAGAACGAAGCTCATCTAAGTATGCAACTCCTTTTATGAATGGGTGTCCTCGTGTGTTCTGCACGGGAAAAAGTGGCCATCTTCTTCTTAGCAACACAGGGCTTCTTGGTATTGTTTGCTCATGCCATTGTTGCCACATGTCTGTTCTTAAGTTTTGTGAGCATTCAGGGTTAAATGGCGTTGACCCAGGGGATGCTGTTCGTATGGAAAGTGGGGAGACCATTTCTCAATGGCAGAAGCTATACTTCTTGAAGTTTGGGATTAGGTCTCTGGGGAATGAGAATGAATGGGACTGGCCAGAAGTATTATCAACAACAGGCAGTCTGATGAGATCCAATGCATCTGCATTTGATATGTCCAAGACTAATTTGTCTCATATGTTGAGTTCATCTGCTGTCATGTCAAGGTCTGGAAAGTCTTCTGACTATGTCATGTTTCCAAAAAATGCTCATACAGACCACAATTTATTAATTGGTGCATTGTCCAGAAAACAAGCGACAACAATCCGGGATGGTTGCAACATTCCACTCAAAGGTTTTACTGGTATTTCACAAAACAGCTCACATGATCAGTTGAAAAACCAGTTAATGGAATCTAATCTGGCTATGTATACAACTGCACCAAATTTTGTTGGAACTCAACTGGATGATGATTGTCAGCCTATACCTCCTTTCTTTGATTCTCTAAAAAGGAAAGGAAATTTGTCTACTGCCCACTCTCCTTTGCAAACTCCAACAAGCCTTTTGAAAGACCATGATTGCATAAAAAAAAAGAATGCAAATGATGGTCTTGTAGGCAAAGATGCAGCTTCCTCCAATGTTGATCTTAGGCTTGGTCAACCACCTCAGACAGGAAATCCACTTCCATCATTTATAGAACCACTGCTGTTTAATGCCCTTGCCAGTCCTCCAAAATCGCAACCTCTGAAGCAGATGATTAATAATGCAGACCTCAGCTGGGAGGAGGAATTACAGAATAATTTTAGCTATGCTGCTGGTTCAATCAAAATGGTTGAAGAAGTGCCTCAGCTTAAACCCAAGAACTGTATGTCTGCTGTGAGTAATGCTTCTGCTAGAGCTAGATCAGAAACTAAAAATGTTGCCAAGGGTTTATCATTTTCACCATTTCTGCAATTTGATAATCAACCTGGGGGAAAGACAAAAGCTAGTGAAAATTTGTGGAATGATGGCAGCCCTATCATGCCCAAGAAATTGTATTCTGATTACGGTCACGCAGGAAGGCAATCAAACAATTCTGGCCTAAGGACCAATAAATGTTTGGACAATGATAAAGGGGTGAACTTTGCTAAAGACTCTGGTGCCAAAATAAATTCTGGATTTGGAATTGGTCAGTTAATGGAATATCCAAGCTCCATCACAAGAGCTGTTGGTGGTAATGATAGCTGTATTTCGGTTGTTAATGGAAAGATATATGAATCAAGTTATGAATCAAGCTTGCCATCAGATACATCTGTTGGTGCAGATATTTTGCGTGGTTCAAACAATGTATCTTTTCTTGGACAGGAAAATCGTGTGACTCCACAGACATCCATTCCATTTGAAGGGATTTTGAAAGGCTTTCCCCGTCATGTTTCAAGTTCTGTGTCAAATCAGCCTCCTACTTTGCCACAGCAGCAGCAGGGCATTAATATAGATGCTTATTTGCTTGATGAAAACATGAGGTTGCTTGCATTGACACAGATACTGGAGTTATCTAAGCAACAGCATGCATTGTATTTTAATAATATGAATCAGAAGCAAGGGAGATCCAGCAGTATTTCAAAAGTTCAGCATTATATGTATGAGGCTTCAACATCTGAACAGGGCACTTCTGGCACATCATTGAAATTGCCCCAAAATAGTGGGATTTGTGGGAATCATGAGAGTACTGTTGGTTTAGAGAAACTGGCTTCCCTCACAGGTATGAACAGATATTGTCATTTGTCTGGCTTGTCACCAATTTGTGATCTTCAAAATGAAGAGACTTCTTTAAGCCTTGGTATAAACAAAGACAATACCAGATCAAGTGTATGTGAAAAATGCTCTGAGCAACCATCAAATATATGTTTGGGAGGCAAGTACACTTGTGCTGCTCGGATAAACTGTTGCAGATGCAATTTTTTATCAGGAATTGAACCCTATTGTTATAACTTGAAGCAACAACTTGCTAATGCCAGTGGTGAAACTTCTTTGAAGATGGCTTCAGATTTTAGTAGAGATGTGAATACTTCGAAGGGCGAAAATATCCACATTGAGCAGGGTGGGAAGTTAGATGGCCAAGACTCAATCAAAATTGGCTTTCATACACCTCAATGGAGAGATGTGCCAAGTAAGGTCAGGAAAGCAGTTTGTGATGCAACATCTTTAGATCAGACAGCTACTGGTTTGGATTGGGAAGGACAAGACAGTGTTCAACTTGGAAACATTTCTATGAAATGCTTCAAAAGAACTATTGATATGGGAGACATGTCAAAAGAGCAAGAAAATTCTAATGTTTCTTCTGGATGCTCTGCTCCTGTGGTTACTCAGGCATCTGTGGAGGTCAACAAAATTGATTCCTGTACTGATGATGCTGTAGGCACTGGCTTTGTCAACAACCTTGTAGTTGATGAAGGGTCAGGTATTGATCAAGGCTGGTCGTCAGATTTGGTTGAAAGTGAAAGAAGTGATGAGTTTCTAGGCTCGATCTCCAGGAGTTACTTGAAAAATGGTCATCTGAGAGTCTTAAATGATCAACCATGTTGCGATCTCCTTGATGACCTTAAACTGTTAGATTCCTTGATATGGAAGAAAGGACGGAATCAAAATCATTTTGTGCTTTCTGCTAATTGTAAAACCACTCAATCTCAAAAAGTCAAGAAGGACCTTAAAGGAAAAAAGCGAAAGAGAAATGTGGTGAGGATTCTAGATGCTTCATTATCTTCTGAATTCCCTTCCTTATTGCATAAAAAGAATGATGAAGGTGCTGGGATTTTTAATTCCTCTTCTAGTTTGTCAAAAGAAATGCAAATGCACTCTTTGTCTAGCCTGCAAAAATCAGCTAACAAGTCTTCCTTTGTTCAACCTAGTAACAAACAAAAACACACTGCATTTTCATCCAAATTTCTTTCTTGTAAGAATCGTCTGAACAAGCATCAAAGTTACAAAGTTGGCTATGAGTCAGAATCAAATTCTGATGCTGAGTTTCACACATTGCCTGGAGTTTCTGGAACAAAGAAATTAAAAAAGGATCTCACTTCTGATTGTTTTGAGCAGTTTCAAATGCAAGAACCAGTCTGTGAGGAACCTGAAAATGATAAGCTGAGGCCATTCTCTTGCAGGAAGGAAAATGCTCATAGAATCACAAGGCCAGTAGTATGTGGAAAATATGGTGAAATATCTAATGGGCATTTGGCTAGAGAGGTGCAAAAACCAGCAAAAATTGTCTCTCTCAGCAAGGTTCTTAAATCTTCCAAAACATGTATGGGCCATACAAATAGAAAACCTAGAATAACTTCAAAAAAGAAATGGAAGAGATTGAGCATTGGAACAAGTAGTGGGCACTGCTGTGGGAACCCTGGTTTAAAAATTAAGGAACACAATGAAACCCAAAATACAATATTTTTGAATGAAATGAATGTTGATGTGTCTATGGAAGATTTGGAGAGAGGTGGCAAGCCACCTGTCATTTACAAAGGGAAGAAAGATGCCAAATCTAAGCAGGGTGATAGTGTTGGAAATAGAGCTAATGTTTCATCGAAGGTGAAGAACAAGGAAATTCGGAAACAGCGTAGCATTAATGAACTCACTGCTAAAGAAACCAAAGTGATGGATATGATCAATTGTGCTCAAGATAGGGAGCCTGGTTTGTGTAGCACAAAAAGTAGAAACTCTATTCAAGGTCACATGAGCATATCCACCATAAATTCAGATGCTTTCTGCTGTGTGTGTCGAAGCTCAAGCAATGATAAAATCAACTGTTTGTTGGAGTGTAGTCAATGTCTGATTAGAGTGCATCAAGCTTGCTATGGTGTTTCCACATTACCCAAAAAAAGCAGTTGGTATTGCAGGCCATGCCGAACAAACTCAAAAAATATTGCTTGTGTCCTATGTGGTTATGGAGGTGGAGCCATGACTCGAGCAATAATGAGTCACACGATTGTCAAGAGCCTCCTGAAAGTGTGGAATGATGAGAAAGATGGCATGCCTAAGCATACAACTTCATGTGAAGTTTTTGAAAAGGAAATAGATGCATTTCCATCCTCAAAAGATGGACTAGAAGTTGATCAAGAAAGTGTTTTGAAGCCCAAAATCGTTGATACAGCAACAGATCTGATGAAAGTTCAAATATCTACAAATCACATACAACACACCCCAACCTCTGTTTCTAATTTCAAGGTACATAACAGCATTACAGCAGGAGTTCTTGATCCAACTGTTAAACAATGGATTCATATGGTTTGTGGTCTTTGGACTCCTGGAACAAGATGCCCCAATGTTGACACCATGAGTGCTTTTGATGTATCTGGTGTTTCGTGTCCAAGAGCAGATGTGGTTTGTTCCATTTGCAATCGACGGGGTGGTTCTTGTATAGAGTGCAGGATTGCTGATTGCTCTGTCAAGTTTCATCCTTGGTGTGCTCATCAAAAGAACCTCTTGCAAAGTGAGACTGAAGGTATTGATGATGAGAAGATTGGATTTTATGGAAGATGCATGCTTCATACTATTGAACCTAGATGTCTGTCCATATATGATCCTCTTGATGAAATTGGCAGTCAAGAAGAAAAGGAATTCACCTGTGCCAGGGTAGAGGGTTACAAGGGCCGTAGGTGGGATGGTTTTCAGAATAATCAGTGCCAAGGTGGATGTCTTGTTCCTGAGGAGCAGCTAAATGCTTGGATTCACATTAATGGGCAGAAATTATATTCACTGGGGCTCCCAAAATTCCCAGATTTAGATATTGAGCATGATTGTCGAGTATGTTTCAGTTGTATTATATAG 5643 0.4044 MESAWQRKCDSPFQPSTSATVPSALSPEQEMNASYCLYPQVAHGLRSKFVGGKQGPVYPSFPHSTTHGSGQADTGNSFVALLYGPPSLLQSEFQDLSDRKLCISSGDCTAALGNSVVGSIESGTFRTSGVGLITENLINRNLQSWATTFPEISSRAMVGLNNSSNFVFHDIQSSNTAIQPTIPGGEKARESFSSPGQCQSTSPASSLNVCCSDIQTTPTVALERSSSKYATPFMNGCPRVFCTGKSGHLLLSNTGLLGIVCSCHCCHMSVLKFCEHSGLNGVDPGDAVRMESGETISQWQKLYFLKFGIRSLGNENEWDWPEVLSTTGSLMRSNASAFDMSKTNLSHMLSSSAVMSRSGKSSDYVMFPKNAHTDHNLLIGALSRKQATTIRDGCNIPLKGFTGISQNSSHDQLKNQLMESNLAMYTTAPNFVGTQLDDDCQPIPPFFDSLKRKGNLSTAHSPLQTPTSLLKDHDCIKKKNANDGLVGKDAASSNVDLRLGQPPQTGNPLPSFIEPLLFNALASPPKSQPLKQMINNADLSWEEELQNNFSYAAGSIKMVEEVPQLKPKNCMSAVSNASARARSETKNVAKGLSFSPFLQFDNQPGGKTKASENLWNDGSPIMPKKLYSDYGHAGRQSNNSGLRTNKCLDNDKGVNFAKDSGAKINSGFGIGQLMEYPSSITRAVGGNDSCISVVNGKIYESSYESSLPSDTSVGADILRGSNNVSFLGQENRVTPQTSIPFEGILKGFPRHVSSSVSNQPPTLPQQQQGINIDAYLLDENMRLLALTQILELSKQQHALYFNNMNQKQGRSSSISKVQHYMYEASTSEQGTSGTSLKLPQNSGICGNHESTVGLEKLASLTGMNRYCHLSGLSPICDLQNEETSLSLGINKDNTRSSVCEKCSEQPSNICLGGKYTCAARINCCRCNFLSGIEPYCYNLKQQLANASGETSLKMASDFSRDVNTSKGENIHIEQGGKLDGQDSIKIGFHTPQWRDVPSKVRKAVCDATSLDQTATGLDWEGQDSVQLGNISMKCFKRTIDMGDMSKEQENSNVSSGCSAPVVTQASVEVNKIDSCTDDAVGTGFVNNLVVDEGSGIDQGWSSDLVESERSDEFLGSISRSYLKNGHLRVLNDQPCCDLLDDLKLLDSLIWKKGRNQNHFVLSANCKTTQSQKVKKDLKGKKRKRNVVRILDASLSSEFPSLLHKKNDEGAGIFNSSSSLSKEMQMHSLSSLQKSANKSSFVQPSNKQKHTAFSSKFLSCKNRLNKHQSYKVGYESESNSDAEFHTLPGVSGTKKLKKDLTSDCFEQFQMQEPVCEEPENDKLRPFSCRKENAHRITRPVVCGKYGEISNGHLAREVQKPAKIVSLSKVLKSSKTCMGHTNRKPRITSKKKWKRLSIGTSSGHCCGNPGLKIKEHNETQNTIFLNEMNVDVSMEDLERGGKPPVIYKGKKDAKSKQGDSVGNRANVSSKVKNKEIRKQRSINELTAKETKVMDMINCAQDREPGLCSTKSRNSIQGHMSISTINSDAFCCVCRSSSNDKINCLLECSQCLIRVHQACYGVSTLPKKSSWYCRPCRTNSKNIACVLCGYGGGAMTRAIMSHTIVKSLLKVWNDEKDGMPKHTTSCEVFEKEIDAFPSSKDGLEVDQESVLKPKIVDTATDLMKVQISTNHIQHTPTSVSNFKVHNSITAGVLDPTVKQWIHMVCGLWTPGTRCPNVDTMSAFDVSGVSCPRADVVCSICNRRGGSCIECRIADCSVKFHPWCAHQKNLLQSETEGIDDEKIGFYGRCMLHTIEPRCLSIYDPLDEIGSQEEKEFTCARVEGYKGRRWDGFQNNQCQGGCLVPEEQLNAWIHINGQKLYSLGLPKFPDLDIEHDCRVCFSCII 1880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00602 1880 ProSiteProfiles Zinc finger PHD-type profile. 1525 1576 IPR019787 -
Pumo9g00602 1880 MobiDBLite consensus disorder prediction 9 25 - -
Pumo9g00602 1880 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1676 1789 IPR013083 -
Pumo9g00602 1880 SMART PHD_3 1527 1574 IPR001965 -
Pumo9g00602 1880 SMART PHD_3 1733 1789 IPR001965 -
Pumo9g00602 1880 SUPERFAMILY FYVE/PHD zinc finger 1522 1579 IPR011011 -
Pumo9g00602 1880 Pfam PHD-finger 1540 1574 - -
Pumo9g00602 1880 Pfam PHD-zinc-finger like domain 1694 1769 - -
Pumo9g00602 1880 MobiDBLite consensus disorder prediction 182 202 - -
Pumo9g00602 1880 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1514 1581 IPR013083 -
Pumo9g00602 1880 MobiDBLite consensus disorder prediction 1438 1466 - -
Pumo9g00602 1880 Pfam Tify domain binding domain 256 302 IPR032308 -
Pumo9g00602 1880 ProSiteProfiles Extended PHD (ePHD) domain profile. 1672 1789 IPR034732 -
Pumo9g00602 1880 MobiDBLite consensus disorder prediction 1438 1456 - -
Pumo9g00602 1880 PANTHER HISTONE-LYSINE-N-METHYLTRANSFERASE 2 KMT2 FAMILY MEMBER 72 334 - -
Pumo9g00602 1880 CDD ePHD 1696 1779 - -
Pumo9g00602 1880 MobiDBLite consensus disorder prediction 1 25 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00602 1527 1592 C2H2 Transcription Factor Family AT3G14740 37.500 2.78e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00602 - - gmx:100816713 3280.73