Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00593 ATGAAAACGAAGCTGCTTCTTCTTATGCTTCTCATGCTCCTCCTTATTCTCGACAAACCCATTTGGATTCTTGCTTCAGCATACCCTCTTGCTCCCTCTCCTCAAGTTCCACCCTTTTCTCCATTTCCCACTTCAATGTCTGCTTCCTCTCCAGGAATTGTGATGGGGGCTGAACAGCAGCACATGGATTCACACAAGAAAATGGTAATTGCTATTGCAGTAGCCAGCACTTCTCTTGGTGCAGTCATTTTGTGTGTGTTGTGCATCTGGATTTACTACACCAAGTACCCTTCAAAATCCAAAGGGAAAAACGTTCAAAGATCAGATGCTGAAAAAGGGTCAGCTTCATCACCATTTTTGAGTAAATTCAGCTCTATAAAGCTGGTTGGTAAGAAAGGGTGTGTTCCAATAATTGACTATAAGCAAATAGAAAAAGCCACCGGCAATTTCAAGGAAATTAACATCTTGGGTGAGGGTGGTTTTGGATGCGTTTACAAGGCCCATTTGGATGATAATTTGGATGTTGCCGTTAAAAAATTGCACTGTGAAAATCAGTATGCTGAGCAAGAATTTGAGAACGAGGTGGATTTGTTAAGTAAAATTCAACACCCAAATGTGATTTCTCTGCTGGGTTGTAGCAGTAATGATGATACAAGGATTATTGTCTATGAGTTGATGCATAATGGATCATTGGAAACTCAATTACATGGACCTTCTCATGGCTCGGCATTGACTTGGCATTTGAGGATGAAAATTGCCCTTGACACAGCAAGGGGATTAAAATATCTGCATGAGCACTGTTACCCTCCGGTGATCCATAGAGATCTGAAATCTTCTAATATTCTTTTAGATACAAAGTTCAATGCCAAGCTTTCTGATTTTGGTCTTGCCATAACCAATGGGTCCCAGAACAAGAACAACCTCAAGCTTTCAGGCACGTTGGGTTACGTTGCCCCGGAGTATCTTTTGGATGGTAAATTGACTGATAAGAGTGATGTGTATGCTTTTGGAGTTGTGCTTCTGGAGCTTCTATTGGGAAAAAAGCCTGTGGAAAAACTAGCACCAGCTCAATGCCAATCTATTGTCACATGGGCCATGCCACAGCTCACAGACAGATCTAAGCTTCCAAACATTGTGGATCCTGTAATTAAGAATACAATGGACCCCAAGCACTTGTACCAGGTTGCTGCTGTGGCCGTGCTATGTGTGCAACCAGAGCCAAGTTACCGTCCTCTGATTGCAGATGTTCTCCACTCACTCATTCCTCTTGTGCCTGTAGAGCTTGGAGGAACACTCAAAGTTGCACAACTGCCACAGCAAGTCTTACCTGCTGACCCACCTGAGGATTCTAGTCAGTGA 1359 0.4297 MKTKLLLLMLLMLLLILDKPIWILASAYPLAPSPQVPPFSPFPTSMSASSPGIVMGAEQQHMDSHKKMVIAIAVASTSLGAVILCVLCIWIYYTKYPSKSKGKNVQRSDAEKGSASSPFLSKFSSIKLVGKKGCVPIIDYKQIEKATGNFKEINILGEGGFGCVYKAHLDDNLDVAVKKLHCENQYAEQEFENEVDLLSKIQHPNVISLLGCSSNDDTRIIVYELMHNGSLETQLHGPSHGSALTWHLRMKIALDTARGLKYLHEHCYPPVIHRDLKSSNILLDTKFNAKLSDFGLAITNGSQNKNNLKLSGTLGYVAPEYLLDGKLTDKSDVYAFGVVLLELLLGKKPVEKLAPAQCQSIVTWAMPQLTDRSKLPNIVDPVIKNTMDPKHLYQVAAVAVLCVQPEPSYRPLIADVLHSLIPLVPVELGGTLKVAQLPQQVLPADPPEDSSQ 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00593 452 Gene3D Transferase(Phosphotransferase) domain 1 226 425 - -
Pumo9g00593 452 Pfam Protein kinase domain 150 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g00593 452 FunFam probable receptor-like protein kinase At1g80640 226 425 - -
Pumo9g00593 452 ProSitePatterns Protein kinases ATP-binding region signature. 156 179 IPR017441 GO:0005524
Pumo9g00593 452 FunFam Protein kinase superfamily protein 117 225 - -
Pumo9g00593 452 CDD STKc_IRAK 156 423 - -
Pumo9g00593 452 ProSitePatterns Serine/Threonine protein kinases active-site signature. 271 283 IPR008271 GO:0004672|GO:0006468
Pumo9g00593 452 PANTHER OS01G0750732 PROTEIN 55 423 - -
Pumo9g00593 452 SUPERFAMILY Protein kinase-like (PK-like) 132 420 IPR011009 -
Pumo9g00593 452 ProSiteProfiles Protein kinase domain profile. 150 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g00593 452 SMART serkin_6 150 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g00593 452 Gene3D Phosphorylase Kinase; domain 1 115 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00593 Pumo-Chr9 9964524 9969764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00593 20 366 Receptor kinase-like Gene Family AT1G80640 47.397 1.05e-100 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Pumo9g00593 Pkinase 8.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00593 - - gmx:100785380 840.491