Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00583 ATGGCTGCATCACATGGTAATGATCCTAGAAACATGGTTTCCATTTCAAGGGTTGTGTCTGTGCATCCCAAGCTTGTGCAACCCCAGAGGGTTTTGACCCTTTCAAACTTGGATAGGCAGTGTCCAAGCCTCATGCACTTGGTGTTCTTTTACAACAACCTTCCTCACCAAAATCTGAAGGACTTGTCCCTCAATTCAGTGTTCTCCAACTTGAAATCTGGCTTGGAAGAGACCTTGACTCTGTCGTATCCTAGTGCAGGTAGGCTTTGGCCAAATCAAAGTGATGGCAAGCTCAACCTGTGGTGCAACAACCAGGGTGCAGTTCTGGCAGAGGCTGAAACCGCTGTTAAAATCTCACAACTTGGAAACCTCTCTGAGTACAATGAGTTCTTTGAAAAGCTGGTTTATAAGCCAGCTTTTGATGGGAATTTCTCAAACATGCCTCTAATTGTTGCTCAGGTTACTAAATTTGCTTGTGGAGGGTATTCAATTGGTATTGGAACAAGCCACTCGTTATTTGACGGGCCAGCAACCTATGACTTCTTGAATGCATGGGCCTCAAATTCTGAAATTGTGAAAGGAAGAAGCAGATCTGGTGAGCTTCCAAAACCAGTGCATGAAAGAGGGATACTTCTGAGTGGTAGTCTTCAAGCCCCAAGAGGGACTCTAAATTTTCCTTCAGGCTCAAGTTTAAATGCTAAGCAAGCAAGGGCCATGGCAATAGATCACTTATATCAACTTATAATGCAAGCAGCTAGTGGACAAAAGGGCTTTCCTATGCAAATTGGAGGACCCTCTAATCCTCCAAAGAAGTGTGTTCTTAAAACCTATCATCTTTCAGGTGCAATGATAGAAGACTTGAAAAGGAAACACTTCCCCATGCAAAGAGGTTCTCTTCCTTTCTCAACCTTTGAGGTTCTTGCGGCTCACCTTTGGAAGGCAAGGACCAAAGCATTAGGGGTGAAGAAAGAGAAGCTAGTGTGCCTCCAATTCGCGATGGACATAAGGAACAAGGTGTCACCTCCATTGCCAAAATCCTTCAGTGGAAACGCCTACGTTCTCGCCTCCATCATGATGCCAGTGGAAGAATTGGAACAAACAAGCCATGAATCCATCATTGACAAAATAAGAGAGGCCAAGAACAGTGTAAACCACGACTATGTGAAAGCCTACGTTGATGCCCTAGATGGACCACAACAAGGTTCTTCACTCCCTCCACTCAAGGAGCTAACTTTGGTCTCCGATTGGACGAGAATGCCCTTTCACAACATCGAGTTCTTTCGTGGAAAAGCAACCTATGCGTGCCCTTTGGCCACTCCTATTCCTCAGGTCGCATATTTCATGCAAAGCCCTAGTGACAACATGGGCGTTGACGTGAGGATTGGGTTTGAGGTTGAAAACTACGTAAGTGCTTTTAGTGAATGCTTTTTGAGCACGGCGTGA 1443 0.4511 MAASHGNDPRNMVSISRVVSVHPKLVQPQRVLTLSNLDRQCPSLMHLVFFYNNLPHQNLKDLSLNSVFSNLKSGLEETLTLSYPSAGRLWPNQSDGKLNLWCNNQGAVLAEAETAVKISQLGNLSEYNEFFEKLVYKPAFDGNFSNMPLIVAQVTKFACGGYSIGIGTSHSLFDGPATYDFLNAWASNSEIVKGRSRSGELPKPVHERGILLSGSLQAPRGTLNFPSGSSLNAKQARAMAIDHLYQLIMQAASGQKGFPMQIGGPSNPPKKCVLKTYHLSGAMIEDLKRKHFPMQRGSLPFSTFEVLAAHLWKARTKALGVKKEKLVCLQFAMDIRNKVSPPLPKSFSGNAYVLASIMMPVEELEQTSHESIIDKIREAKNSVNHDYVKAYVDALDGPQQGSSLPPLKELTLVSDWTRMPFHNIEFFRGKATYACPLATPIPQVAYFMQSPSDNMGVDVRIGFEVENYVSAFSECFLSTA 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00583 480 Gene3D - 258 476 IPR023213 -
Pumo9g00583 480 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 21 433 - -
Pumo9g00583 480 Gene3D - 10 220 IPR023213 -
Pumo9g00583 480 Pfam Transferase family 13 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00583 Pumo-Chr9 9772506 9778810 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00583 13 467 Monolignol Biosynthesis Gene Families AT5G48930 23.226 1.34e-29 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00583 K15400 - gmx:100779295 864.374