Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00572 ATGGAAGGACTAAGCATGAAGGAGCCATACTTTTGTGACAGACCAAGCAGCAGCATCTTCTCTTCTTCTGCTCCTCCAGAGGCTCCCCCAAGTCCAAGTACCCCACTTCAACATCCACATGAAAAGAAAAAACAACAGCTATCTGTTGAGGAAGAAGAGGAAGAAAAGGAGCCAAAGCATGTTATTACCCTATTGGATCTGAATATTAATGTCTCATCAGGTGGTGATGATGATTCAGATTCATGCACTCCAGAAGAAGGACCAGAACTCAACCTCATCACTTGTTTGGATGTGGGGTCATCATCCATTAATAATGCCAATTCGTCATCAGAAACAACAACAACAAACCCTCTTGGTTCTTCTGATGCTGCTGAGCCTAGAGTGTTCTCTTGCAACTACTGCAACAGAAAGTTCTACAGTTCACAAGCACTAGGTGGCCACCAAAATGCACACAAGAGGGAGAGGTCAATTGCAAAGAGAGGGCACAGGTTTGGATCACAGATAATGGCCTTTGGCCTTCCCCTTTTGCATCATCATAACAACAACAACAACAACCGTTTTGCAAGCATGGCTTCTCTACCCCTTTATGGTGCTTGCAGCAATAATAGAGGAGCTCTTGGAATTCAGGCACACTCCATGATCCAGAAGCCTTCTTCTTCTCATCATCATCATCATCATCATGTGAATGGATTTGGAGGCTCTTATGCACACCATCATGGTTGGTCAAGACCAATCATTGATCAACAACCCGGAATAGCAAAGCTGGCCGTGGCTGATTTTCACAGAACAAAATCAGCTTTGTCATCATCATCACAAAGCAGTGTTGGTAGGTTTGAAATGCTTAATACCATGTTGAATTCTGCAGCTAGTGGTGGAACTCGTTTGAAGACCAATCAAGAAGAAATGAAGCACCTTGATCTAAACCTCAAGCTCTGA 936 0.437 MEGLSMKEPYFCDRPSSSIFSSSAPPEAPPSPSTPLQHPHEKKKQQLSVEEEEEEKEPKHVITLLDLNINVSSGGDDDSDSCTPEEGPELNLITCLDVGSSSINNANSSSETTTTNPLGSSDAAEPRVFSCNYCNRKFYSSQALGGHQNAHKRERSIAKRGHRFGSQIMAFGLPLLHHHNNNNNNRFASMASLPLYGACSNNRGALGIQAHSMIQKPSSSHHHHHHHVNGFGGSYAHHHGWSRPIIDQQPGIAKLAVADFHRTKSALSSSSQSSVGRFEMLNTMLNSAASGGTRLKTNQEEMKHLDLNLKL 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00572 311 Gene3D Classic Zinc Finger 105 170 - -
Pumo9g00572 311 MobiDBLite consensus disorder prediction 1 59 - -
Pumo9g00572 311 ProSitePatterns Zinc finger C2H2 type domain signature. 131 151 IPR013087 -
Pumo9g00572 311 ProSiteProfiles Zinc finger C2H2 type domain profile. 129 156 IPR013087 -
Pumo9g00572 311 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 6 311 IPR044246 GO:0009788
Pumo9g00572 311 MobiDBLite consensus disorder prediction 37 59 - -
Pumo9g00572 311 FunFam Zinc finger protein 2 104 174 - -
Pumo9g00572 311 SUPERFAMILY beta-beta-alpha zinc fingers 126 156 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00572 Pumo-Chr9 9635383 9637204 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00572 16 311 C2H2 Transcription Factor Family AT5G10970 35.831 1.54e-39 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00572 - - gmx:100820461 402.905