Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00567 ATGGCAGAGGCTGTCCTTGAAATTGTGCTTGAGAATTTGAACTCACTCATTCAAAAGGAGTTGAGACTATTTTGTGGTTTCGATCAAGAAATGAAAAGGCTTGCCAACTTGTTCACTGCAATCAAGGCTACCCTTGAAGATGCTGCCGAGAAACAATACTCAGAGAGAGCTATAAAGGACTGGCTGGGAAAGCTAAAAGAAGCAGCTTACATCCTTGATGACATCTTGGACGAGTGTGCCTATGAAGCATTGGGGTTGGAGTATCAAGGAGTCAATTGTGGTCTACCAGACAAGGTACAAAGCTCTTGCTTATCCTCTTTTCATCCCAATCACGTTGTTTTCCGTTATGAAATTGCTAAGAAAATGAAAAGGATAAGTGAAAGATTACATGAAATTGCTCAAGAAAAGAAATTTCATTTGACTGTGATGGTTCCTGAGAGAATAAGTGGAGACAATGAGTGGCGCCAAACCACTTCATTCATCACTGAACCACAGGTCTATGGAAGAGAAGAAGATAAGAATAGAATTGTAGACCTTTTGGTTGCTTCTCAATCCGAGGATTTACAAGTCTATCCAATCGTAGGTCTAGGTGGACTTGGAAAAACAACACTTGCCCAACTCATCTTCAACCATGAGAGGGTAATCAACCACTTTGAGCTAAGAATTTGGGTGTGTGTTTCTGAAGATTTCAGTTTGAAGAGAATGACAAGAGCTATCATCGAAGCAACATCTGGGTGTGGCTGTGAGGATGTGGATCTAGAGCCACTACAAAGAAGACTTCAAGAGTTGCTTCAAACAAAAAGATATTTACTTGTTTTGGATGATGTGTGGGATGATAAGCTAGAGAATTGGCAGAAGTTGAAACCTGTCTTGGCTTGTGGAGCAATGGGTGCTTCTATTTTGGTTACTACTCGTCTTGCAAAGGTTGCAAGGATCATGGGAACAGTGACTCCTTATGACTTATCATTGCTACCTGACGATAATTGTTGGGAATTGTTTAAATACCATGCTTTTAGACCGAACGAGGGAGAACAGTCAGAGCTTGATGATATAGGGAAGAGGATAGCAAAGAAGTGTGGGGGAGTGCCTCTTGCAGCAAAAGCTCTAGGAGGTCTTCTACACTCCAAAACCGATAAAAGAGAGTGGCTCAATGTTATCGAAAGCAACCTTTTGAAAATATCAGAGAGTGAAAACTTAATAATGCGTGTCCTAAAATTAAGTTACTTGCACTTGCCAATAAAATTCAGACAATGTTTTGCTTTTTGTGCAATATTTCCCAAAGATGAAAAAATAGAAAAGCAATATTTAATTGATCTTTGGATGGCTAATGGATTCATTTCATCTAATGAAGGATTGGATTCTAAAGATGTTGGAGATGGTGTGTGGAATGAATTATATTGGAGATCATTTTTTCAGGATATTGAGACAGATGATTTTAGCAAAGTTGCAAGTTTCAAGATGCATGATCTTGTTCATGATCTTGCACAATCTGTTGCAGAAGAGGTTTGTTGCATTACATATGACAACGGTGTAACCACTTTGTCTGAAAGAATCCATCATCTCTCGGATAGTACTGATAAGGCCATTAATCGAATCCAGTTGCATCCTGACAAATCTTTAAGGACCTTCATATCATCCTATCACACTAATACTGACCAACTTTATCTTCATGTATTGAAGTGTTATTCTTTGCGGGTGCTTCATTGTGAAACGAGCGAATTGTCATCTAAAATTGGTCATTTAAAACATCTAAGGTACTTGAATCTTTGTCAGAGTAGCTTCAAAACTCTTCCAGAATCGCTATGTGAATTGTGGAATTTGCTGATATTAATATTAGACAATTGTCGATCTCTCCAAAAGTTGCCTAACAGTTTGGTACGTTTAAAATCTCTGCAAAAGCTATCTTTTATTGGGTGTAGCTCACTATCAAGCTTGCCTTCTCATATTGGGAAGTTGACTTCACTAAGGAATTTAACCATGTACTATGTTGGCAAAGAAAAAGGGTTCCTTTTGGCAGAATTAAGACCACTGAAGCTTAAAGGAGATCTTGACATCAAGCATCTGGAGAATGTAAAAAGTGTAATGGATGCCGAAGAAGCCAATATGTCAAGTAAGCAACTACACCATTTGTCATTGTCATGGGGCAGGAACGAAGAGTCTGAATTACAAGAAAATGTTGAGCAAATTCTTGAAGCACTTCAACCTGATACCCAACATCTTCAGAGTTTGTGGGTGGAAGGATATAACGGAGCCCATTTCCCACAATGGATGTCTTGTCCTTCTCTCAAGCAATTACACATTTGTAGGCGTCTTAAGTTCAATGTGTCGTTGGGTTTTCAGTGGCTAACTTGTCTTCAGAGTTTGAGGATTGACAGATGTAGAGAGGTGGAAGGTGGGGTGGTTTTATCGGAGGTGGGTGAGTTTCCAGAGGTATTAAATTCGCGTGGGGTTCATGTGAGAGAAGATAATGGGCCAACTGAGAATGAGAGAGATATTGGGCCAAATAAGTGA 2511 0.3943 MAEAVLEIVLENLNSLIQKELRLFCGFDQEMKRLANLFTAIKATLEDAAEKQYSERAIKDWLGKLKEAAYILDDILDECAYEALGLEYQGVNCGLPDKVQSSCLSSFHPNHVVFRYEIAKKMKRISERLHEIAQEKKFHLTVMVPERISGDNEWRQTTSFITEPQVYGREEDKNRIVDLLVASQSEDLQVYPIVGLGGLGKTTLAQLIFNHERVINHFELRIWVCVSEDFSLKRMTRAIIEATSGCGCEDVDLEPLQRRLQELLQTKRYLLVLDDVWDDKLENWQKLKPVLACGAMGASILVTTRLAKVARIMGTVTPYDLSLLPDDNCWELFKYHAFRPNEGEQSELDDIGKRIAKKCGGVPLAAKALGGLLHSKTDKREWLNVIESNLLKISESENLIMRVLKLSYLHLPIKFRQCFAFCAIFPKDEKIEKQYLIDLWMANGFISSNEGLDSKDVGDGVWNELYWRSFFQDIETDDFSKVASFKMHDLVHDLAQSVAEEVCCITYDNGVTTLSERIHHLSDSTDKAINRIQLHPDKSLRTFISSYHTNTDQLYLHVLKCYSLRVLHCETSELSSKIGHLKHLRYLNLCQSSFKTLPESLCELWNLLILILDNCRSLQKLPNSLVRLKSLQKLSFIGCSSLSSLPSHIGKLTSLRNLTMYYVGKEKGFLLAELRPLKLKGDLDIKHLENVKSVMDAEEANMSSKQLHHLSLSWGRNEESELQENVEQILEALQPDTQHLQSLWVEGYNGAHFPQWMSCPSLKQLHICRRLKFNVSLGFQWLTCLQSLRIDRCREVEGGVVLSEVGEFPEVLNSRGVHVREDNGPTENERDIGPNK 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00567 836 FunFam Probable disease resistance protein At1g63360 408 497 - -
Pumo9g00567 836 CDD RX-CC_like 2 133 IPR038005 -
Pumo9g00567 836 Gene3D - 408 498 IPR036388 -
Pumo9g00567 836 Gene3D - 5 133 - -
Pumo9g00567 836 Gene3D Ribonuclease Inhibitor 528 813 IPR032675 -
Pumo9g00567 836 Gene3D - 324 407 IPR042197 -
Pumo9g00567 836 PANTHER DISEASE RESISTANCE PROTEIN RP 61 790 IPR044974 GO:0006952
Pumo9g00567 836 SUPERFAMILY L domain-like 486 794 - -
Pumo9g00567 836 PRINTS Disease resistance protein signature 190 205 - -
Pumo9g00567 836 PRINTS Disease resistance protein signature 626 642 - -
Pumo9g00567 836 PRINTS Disease resistance protein signature 263 277 - -
Pumo9g00567 836 PRINTS Disease resistance protein signature 359 373 - -
Pumo9g00567 836 MobiDBLite consensus disorder prediction 816 836 - -
Pumo9g00567 836 Gene3D - 152 317 IPR027417 -
Pumo9g00567 836 Pfam Rx N-terminal domain 5 87 IPR041118 -
Pumo9g00567 836 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 422 IPR027417 -
Pumo9g00567 836 Pfam NB-ARC domain 169 408 IPR002182 GO:0043531
Pumo9g00567 836 FunFam Probable disease resistance protein At1g61300 148 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00567 Pumo-Chr9 9526921 9532566 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00567 177 782 WRKY Transcription Factor Family AT5G45050 22.455 2.30e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00567 - - gmx:100777175 1060.44