Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00565 ATGCATATCTTAACCAAGGTACTGTCTTCACAAAGGTTCTATGCTTTCAAAGACCAACTCAGAGCATTGGAAAAGCTTTCTATGGCCAACAACCACCTTGACTGGCTGGGAAAGCTTAAAGATGCAGCTTACATCCTTGATGACATCTTGGATGAGTGTGCCTACGAAGCATTGGGGTTGGAGTATCAAGGAGCCAACTGTGGTCTACCAGACAAGGTACAAAGCTCTTGCTTATCCTCTTTTCATCCAAAGCATGCTGTTTCCCGTTACAAAATTGCTAAGAAAATGAAAAGGATAAGTGAGAGATTACATGAAATTGCTCAAGAAAGGAATTTTCATTTGGCTGTGATGGTTCCTGAGAGAAGTGGAGTCATTGAGTGGTGCCAAACCATTTCATTCATCACTGAACCACAGGTCTATGGAAGAGAAGAAGATAAGAATAAAATTGTAGACCTTTTGGTTCATGATGCTTCTCAATCCAAGGATTTACCAGTCTATCCAATCGTAGGTCTAGGTGGACTTGGAAAAACAACACTTGCCCAACTCGTCTTCAACCATGAGAGGGTAGTCAACCACTTTGAGCCCAGAATTTGGGTATGTGTTTCGGAAGATTTCAGCCTGAAGAGAATGACAACAGCCATCATTGAAGCAATATCTGGGCATGCTTGTGAGGATTTGGATCTAGAGCCACTACAAAGAAAACTTCTAGATTTGCTTCAAAGAAAAAGATATTTACTTGTTTTGGATGATGTGTGGGATGATAAGCCAGAGAATTGGCTGAGGTTGCAACCTGTTTTGGCTTGTGGGGCAAAGGGTGCTTCCATTTTGGTTACTACTCGTCTTGTAAAGGTTGCAGAAATCATGGGAACAATTCCTCCTTATGACTTATCAATGCTACCTGACTATAGTTGCTGGGAATTGTTTAAACACCAAGCCTTTCGACCAAATGAGGAAGAACAGGCAGAGCTTGTGGACATAGGGAAGAGGATAGCAAAGAAGTGTAGGGGAGTGCCTCTTGCAGCAAAAGCTCTAGGAGGTCTTCTACGCTTCAAAAGAGAAAAAAGAGAGTGGCTCAATGTTATGGAAAGCAACCTTTTGAAAATATCAGAGAGTGAAAACTCCATATTGCCTGTCCTAAAGTTAAGTTACTTGCACTTGCCAATAAAACTCAGACAATGTTTTGCTTTTTGTGCAATATTTCCCAAAGCTGAAAACATAGAAAAGCAATATTTAATTGAGCTTTGGATGGCTAATGGTTTCATTTCACCCAATGAGAGATTAGATTCTGAAGATGTTGGTGATGGTGTGTGGAATGAATTCTATTGGAGATCATTTTTTCAGGATATCACAACTGATGATTTTGGCAAAGTTAAAAGTTTCAAGATGCATGATCTTGTTCATGATCTTGCACAATCTGTTGTAGAAGAGGTTTGTTGCATTACAAATCATAATGATGTAACAACGTTTTCTGAAACAACCCAACATCTCTCAGTTCATACAAACGAAGCCATTAATCAAATCCTGTTGCATCCAGACAAATCTTTGAGGACCTATATATTGCGATACAGCAATATTACTGACGATCTTTCTCATGTATTGAAGTGTTATTCTTTGCGGGTGCTTCGCTTAAGTGTAGCAAGAGAAGAATTGTCATCTAAAATTGGTTGTTTAAAACATCTAAGGTACTTGAATCTTTCTTGGAGTAAGTTCAAAACCCTTCCAGAATCACTGTGTAAATTGTGGAATTTGCAGATATTAGAATTAGACTATTGTATAAATCTCCAAAAGTTGCCTAACAGTATGATAGGTTTAAAATCTCTACAAAAGCTATCTTTGATTGATTGTCACTCACTTTCAAGCTTGCCTCCTCAGATTGGGAAGTTGACTTCCCTAAGGAATTTAAGCACTTACAAAGTTGTCCAGAAAAGAGGGTTTGGATTGGCAGAATTGGGCCCACTGAGGCTTAAAGGAGATCTTCACATCATGTATATGGAGAGAGCAAAAAGTGTAATGGATGCCAAAGAAGCCAATATGTCAAGTAAGCAACTGAACCGGTTGAAGTTGGTGTGGGGCTTTAATGGAGGTGAATGTGAAGAAAATGTTGAGCAGATTTTTGAAGTGCTTCTACCTGATCCCCAACATCTTCAGATTTTGCTTGTGACAGGATATAAAGGTGCCCATTTCCCACAGTGGACGTCTTGTCCTTCTCTGAAGAAATTAGATATTTGGAGGTGTAAGTTCAATGTGTCAGCAGGTTTTCAGTGGCTAACTTGTCTTCAGGAGTTGAGGATTTTCGAATGCAAAGAGGTGGAAGGTTTGCATGAGGCTTTACAACATATGACTGTCCTGCAGGAGTTACGTTTATGGGATCTTCCAAACTTAGAATCCTTGCCTGACTGCTTTGGAAACCTTCCCTTTCTTCGCCTCTTGACTATTTGTAAGTGTTCCAAGTTGAGGTGTCTTCCAACGAGCCTAAGCCTAAGCAATCTGGAGAGCTTGTGGATTGGTCGTTGCCCTGAGTTATGGAAACGATGTCAGAAGGACACTGGAGAGGACTGGCCAAAAATAGCTCACGTTCCTGATATTAGGTTTGATATGAACTTGCAAAGAATGTTTATGGATTTGCACTCTGACACCAGGAGGCTTTATCACCCGCTCCTATGA 2664 0.4024 MHILTKVLSSQRFYAFKDQLRALEKLSMANNHLDWLGKLKDAAYILDDILDECAYEALGLEYQGANCGLPDKVQSSCLSSFHPKHAVSRYKIAKKMKRISERLHEIAQERNFHLAVMVPERSGVIEWCQTISFITEPQVYGREEDKNKIVDLLVHDASQSKDLPVYPIVGLGGLGKTTLAQLVFNHERVVNHFEPRIWVCVSEDFSLKRMTTAIIEAISGHACEDLDLEPLQRKLLDLLQRKRYLLVLDDVWDDKPENWLRLQPVLACGAKGASILVTTRLVKVAEIMGTIPPYDLSMLPDYSCWELFKHQAFRPNEEEQAELVDIGKRIAKKCRGVPLAAKALGGLLRFKREKREWLNVMESNLLKISESENSILPVLKLSYLHLPIKLRQCFAFCAIFPKAENIEKQYLIELWMANGFISPNERLDSEDVGDGVWNEFYWRSFFQDITTDDFGKVKSFKMHDLVHDLAQSVVEEVCCITNHNDVTTFSETTQHLSVHTNEAINQILLHPDKSLRTYILRYSNITDDLSHVLKCYSLRVLRLSVAREELSSKIGCLKHLRYLNLSWSKFKTLPESLCKLWNLQILELDYCINLQKLPNSMIGLKSLQKLSLIDCHSLSSLPPQIGKLTSLRNLSTYKVVQKRGFGLAELGPLRLKGDLHIMYMERAKSVMDAKEANMSSKQLNRLKLVWGFNGGECEENVEQIFEVLLPDPQHLQILLVTGYKGAHFPQWTSCPSLKKLDIWRCKFNVSAGFQWLTCLQELRIFECKEVEGLHEALQHMTVLQELRLWDLPNLESLPDCFGNLPFLRLLTICKCSKLRCLPTSLSLSNLESLWIGRCPELWKRCQKDTGEDWPKIAHVPDIRFDMNLQRMFMDLHSDTRRLYHPLL 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00565 887 PRINTS Disease resistance protein signature 165 180 - -
Pumo9g00565 887 PRINTS Disease resistance protein signature 334 348 - -
Pumo9g00565 887 PRINTS Disease resistance protein signature 602 618 - -
Pumo9g00565 887 PRINTS Disease resistance protein signature 238 252 - -
Pumo9g00565 887 Gene3D - 125 291 IPR027417 -
Pumo9g00565 887 Gene3D - 383 472 IPR036388 -
Pumo9g00565 887 Gene3D Ribonuclease Inhibitor 674 849 IPR032675 -
Pumo9g00565 887 Gene3D Ribonuclease Inhibitor 473 641 IPR032675 -
Pumo9g00565 887 Gene3D - 299 382 IPR042197 -
Pumo9g00565 887 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 126 397 IPR027417 -
Pumo9g00565 887 FunFam Probable disease resistance protein At1g63360 383 472 - -
Pumo9g00565 887 Pfam NB-ARC domain 143 383 IPR002182 GO:0043531
Pumo9g00565 887 FunFam Probable disease resistance protein At1g61300 124 292 - -
Pumo9g00565 887 PANTHER DISEASE RESISTANCE PROTEIN RP 48 815 IPR044974 GO:0006952
Pumo9g00565 887 SUPERFAMILY L domain-like 461 838 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00565 Pumo-Chr9 9507747 9512257 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00565 159 629 WRKY Transcription Factor Family AT5G45050 22.679 7.91e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00565 - - gmx:100777175 1098.19