Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00555 ATGGAGGAGATGTCCTTTGTGGTTGCAGTGCCATTAAGAGTAGGTAATTGTAATTGTAATTGTAATTGTAATTCAGTCTGTGATAACCCAACCATAGTTCCCCACATGGATGTATCCAGATTTAAGCTGATGGCGGATACAGGGTTGTTATCTAATTCTGTAACTAAGGTTTTCACCAAGACAGTTGCAGGTTCGGATGATTGTCATGATAGTGGCAATTTGGAGGATGACGTTGGTATTGCTGAAGTTATACCACCTAAACAGGACAGGGAAGGAGAGAGTCCTATGTTGGATATGATATCCCAAAATAGAAGCACTTTGGTTGCTGGTGATGAAGTGTTAACCACGGAAATCGAGGAGGATTCATTGTCGTTGGAAGGTGACCAGTTTGTTGATAGCTCGTGTTCTCTTTCGGTAGTCAGTGAGAACAGTAGTGTGTGTGGAGAGGAGTCCTTCTGTTTTGATGCTACTTCGGATGTTGGGACACCGTGTTCCGCAGACACAGAGAAGAGCATCTGTGCTGTCAATATTGTTGCTGATGCTGTTGACTTGGGGGAGTCAAATGTTGACACAGATATTACGATCGATCCTCTTGCTGTGGCAGTGAGCCTTGAAGAAGAGACTGGAGTTAGATCTGGCCCAAAATCTTCTGCTGTTGATCTTCATCAGTTGCCTCAGGAAAAAGGGGTGAGTGGAACGGTTGGTCGGAGTGTTTTTGAATTGGATTATACCCCACTTTATGGATTCATGTCTTTGTGTGGAAGAAGACCTGAGATGGAAGATGCAGTTGCAACTGTACCTCGGTTTCTGAAAATTCCTATTCAAATGCTAATCGGTGATCGGGTAATTGATGGAATAAACAAGTGTTTTAGTCAGCAGATGACCCATTTCTTTGGAGTCTATGATGGTCATGGTGGCTCTCAGGTTGCAAACTATTGTCGTGTTCGTATCCATTTGGCCTTGGCTGAGGAAATAGAATTTGTCAAGGAAGGTATAATCAGTGGAAGTACGAAGGATGGTTGTCAAGATCAGTGGAAAAAAGTTTTCACCAATTGTTTCTTAAAGGTCGATGCTGAGGTTGGAGGGAAAGTTAATAATGAACCTGTTGCCCCAGAAACTGTTGGCTCCACTGCTGTTGTTGCTGTTATTTGTTCATCTCATATCATAGTTGCAAATTGTGGTGATTCAAGAGCGGTTCTATGTCGTGGCAAAGAACCCATGGCATTATCAGTGGACCATAAACCTAACCGAGATGATGAATATGCAAGAATTGAGGCAGCTGGAGGAAAGGTGATTCAATGGAATGGCCATCGTGTATTTGGTGTTCTTGCAATGTCAAGGTCAATTGGCGATAGATATTTGAAGCCGTGGATTATTCCAGAACCTGAGGTTACGTTCGTTCCCCGTACAAAAGACGACGAGTGTCTCATTCTGGCCAGCGATGGTCTGTGGGACGTTATGACGAACGAAGAGGTGTGTGACCTCGCTCGGAAACGAATAATTCTCTGGTACAAGAAAAATGGCTTGGAACAACCCTCATCAGAAAGGGGAGAGGGAATTGATCCTGCTGCACAAGCAGCAGCAGAATTCCTATCAAATCGCGCCCTTCAGAAAGGAAGCAAAGATAACATCACTGTGATTGTGGTTGATTTGAAACCCCAAAGAAAATATAAGAGCAAGACATGA 1686 0.4353 MEEMSFVVAVPLRVGNCNCNCNCNSVCDNPTIVPHMDVSRFKLMADTGLLSNSVTKVFTKTVAGSDDCHDSGNLEDDVGIAEVIPPKQDREGESPMLDMISQNRSTLVAGDEVLTTEIEEDSLSLEGDQFVDSSCSLSVVSENSSVCGEESFCFDATSDVGTPCSADTEKSICAVNIVADAVDLGESNVDTDITIDPLAVAVSLEEETGVRSGPKSSAVDLHQLPQEKGVSGTVGRSVFELDYTPLYGFMSLCGRRPEMEDAVATVPRFLKIPIQMLIGDRVIDGINKCFSQQMTHFFGVYDGHGGSQVANYCRVRIHLALAEEIEFVKEGIISGSTKDGCQDQWKKVFTNCFLKVDAEVGGKVNNEPVAPETVGSTAVVAVICSSHIIVANCGDSRAVLCRGKEPMALSVDHKPNRDDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVTFVPRTKDDECLILASDGLWDVMTNEEVCDLARKRIILWYKKNGLEQPSSERGEGIDPAAQAAAEFLSNRALQKGSKDNITVIVVDLKPQRKYKSKT 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00555 561 ProSiteProfiles PPM-type phosphatase domain profile. 246 551 IPR001932 -
Pumo9g00555 561 SUPERFAMILY PP2C-like 239 553 IPR036457 -
Pumo9g00555 561 Gene3D - 233 561 IPR036457 -
Pumo9g00555 561 FunFam Protein phosphatase 2C 16 234 561 - -
Pumo9g00555 561 PANTHER PROTEIN PHOSPHATASE 208 551 IPR015655 GO:0004722|GO:0006470
Pumo9g00555 561 ProSitePatterns PPM-type phosphatase domain signature. 297 305 IPR000222 GO:0043169
Pumo9g00555 561 SMART PP2C_4 234 549 IPR001932 -
Pumo9g00555 561 CDD PP2Cc 247 551 IPR001932 -
Pumo9g00555 561 Pfam Protein phosphatase 2C 284 544 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00555 Pumo-Chr9 9291426 9296579 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00555 143 561 PP2C-type Phosphatase Gene Family AT1G17550 54.419 1.17e-159 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00555 K14497 - gmx:100805281 1042.34