Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00532 ATGATAACTTGGAACCTTTTGCACGTAAGAATAAGTTGTACACACGCAATAGCGCTATTAATTCTTCATTTTTTGTTGTTGGTCAAAGAAGTAGCACCTGGGAACCCTGAATATTCAAGCTGTGAAATGGGGTACCTTGATTCAGTTTTGTCCTCTTCAGGCCAGGTTCATGTTGCAGAAGATTCACCTGTCAGCGGAGGAGGCCTTAGTCAGAATGGCAAATTTAGCTATGGGTATGCTAGCTCCCCTGGCAAGAGATCTTCAATGGAAGATTTTTATGAAACAAAAATTGATGGTGTTGGTGGTGAAATTGTTGGCCTTTTTGGAGTTTTTGATGGCCATGGTGGTGCTCGTGCTGCCGAGTATGTCAAGAAAAACCTATTTAGTAATTTGATCAGACATCCAAAATTCATTTCTGACACCAAATCTGCAATAGCTGATGCATATAACCATACCGATTCTGAATTTCTGAAATCTGAAAATAATCAAAACAAAGATGCTGGATCAACTGCTTCCACTGCCATTCTTGTCGGTGACCGTTTGCTTGTTGCAAATGTTGGGGACTCCAGAGCTGTTATATGCAGGGGTGGAAATGCCATTGCTGTTTCTCGAGATCACAAGCCAGACCAAACTGATGAGAGGCGAAGGATTGAAGATGCTGGTGGCTTTGTTATGTGGGCTGGAACTTGGAGAGTTGGTGGCGTTCTAGCTGTTTCTCGTGCATTTGGTGATAGACTCCTGAAGCAGTATGTTGTTGCTGATCCGGAAATCCAGGAAGAAAAGGTTGATAGCTCTCTTGAGTTTCTTATAATGGCTAGTGATGGACTATGGGATGTCGTCTCAAATGAGGAAGCTGTTTCTATGATTAAACCAATTGAGGATGCAGAAGAGGCAGCAAAGAGGCTGATGCAAGAAGCATATCATAGAGGTAGTGCTGACAACATTACATGCGTTGTTGTTCGTTTTTTGTTGAACCAAGGTGCCTCTTCTCATAGTAACTCTGGCTAA 1008 0.4246 MITWNLLHVRISCTHAIALLILHFLLLVKEVAPGNPEYSSCEMGYLDSVLSSSGQVHVAEDSPVSGGGLSQNGKFSYGYASSPGKRSSMEDFYETKIDGVGGEIVGLFGVFDGHGGARAAEYVKKNLFSNLIRHPKFISDTKSAIADAYNHTDSEFLKSENNQNKDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERRRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKVDSSLEFLIMASDGLWDVVSNEEAVSMIKPIEDAEEAAKRLMQEAYHRGSADNITCVVVRFLLNQGASSHSNSG 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00532 335 ProSitePatterns PPM-type phosphatase domain signature. 107 115 IPR000222 GO:0043169
Pumo9g00532 335 SMART PP2C_SIG_2 71 322 IPR001932 -
Pumo9g00532 335 FunFam probable protein phosphatase 2C 59 68 326 - -
Pumo9g00532 335 CDD PP2Cc 75 322 IPR001932 -
Pumo9g00532 335 SUPERFAMILY PP2C-like 70 322 IPR036457 -
Pumo9g00532 335 SMART PP2C_4 66 320 IPR001932 -
Pumo9g00532 335 Pfam Protein phosphatase 2C 104 315 IPR001932 -
Pumo9g00532 335 ProSiteProfiles PPM-type phosphatase domain profile. 76 322 IPR001932 -
Pumo9g00532 335 Gene3D - 68 326 IPR036457 -
Pumo9g00532 335 PANTHER PROTEIN PHOSPHATASE 65 321 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00532 Pumo-Chr9 8499219 8508035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00532 43 334 PP2C-type Phosphatase Gene Family AT4G31750 89.041 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00532 K17506 - gmx:100795017 619.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00532 9 8499219 8508035 Pumo9g00532 9 8499219 8508035 ECH
Pumo10g00238 10 3251368 3257166 Pumo9g00532 9 8499219 8508035 ECH