Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00514 ATGGAATCAACATGCGTGGATACTTCACTCAATCTTAACGTTGATCCTTCTTCTATGTACATGGATGGGGTTTTGGTTGAAGAGTTGCGTCGTCTAAGTTGTGAGAACAAGAAGTTGACCGAGATGTTGACCCAGTTGTGTGAGAACTACATGGCTCTGCAGAAGCAATTGAGCCAATTGATCATCAACACGAATCTTGAGCAAGACCCAATTGAATCGCGCAAGAGAAAAGCCGAGAGTGATCAATGTTGTACCAACAAATTCGTTGGTGTTAATAATATTGCTGAGTGCAGCTCCATCATCACCGAGGATTCGTTCAAAAAGTACAACTCCTCGCCCAAGGTTTCCAAAGTTCTTGTCAAGACCGAAGCATCTAATAATAGCTTATATGTGATGGACGGATATCAATGGAGGAAATATGGTCAGAAGGTCACTAGGGATAACCCTTCTCCTAGAGCTTACTTCAGGTGCTCCTTTGCCCCAAGCTGCCCCGTGAAAAAGAAGGTGCAAAGGAGTTTAGAGGACCCTACAATACTTGTTACAACGTATGAAGGAGAGCATAACCATGGTCATCAAAGAGCTGAAATATCACTTGTCTCAAACCAAAGTGAAGCCCCTAATCCTAAAGGGTCAAGTCCTGTTTCCTCACCTACTACACCCACTATTCGAAGTGCTTGCTCCACCGTAACGCTTGATTTGGTCAAGTCAGGATTGGTTGAACTTGAAAGTGCCCAAAAGTCCTCTATCCAGCAGTTCTTGGTTCAACAAATGGCTACTTCTTTGACAAGGGATCCCAATTTCACAACAGCGCTTGCCACTGCCATTTCAGGACAAATTCTAGAGACCAAATGGTGA 855 0.4386 MESTCVDTSLNLNVDPSSMYMDGVLVEELRRLSCENKKLTEMLTQLCENYMALQKQLSQLIINTNLEQDPIESRKRKAESDQCCTNKFVGVNNIAECSSIITEDSFKKYNSSPKVSKVLVKTEASNNSLYVMDGYQWRKYGQKVTRDNPSPRAYFRCSFAPSCPVKKKVQRSLEDPTILVTTYEGEHNHGHQRAEISLVSNQSEAPNPKGSSPVSSPTTPTIRSACSTVTLDLVKSGLVELESAQKSSIQQFLVQQMATSLTRDPNFTTALATAISGQILETKW 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00514 284 SUPERFAMILY WRKY DNA-binding domain 129 191 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo9g00514 284 FunFam WRKY transcription factor 40 116 193 - -
Pumo9g00514 284 ProSiteProfiles WRKY domain profile. 126 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo9g00514 284 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 25 279 IPR044810 GO:0003700
Pumo9g00514 284 MobiDBLite consensus disorder prediction 201 221 - -
Pumo9g00514 284 Gene3D WRKY domain 114 191 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo9g00514 284 Pfam WRKY DNA -binding domain 133 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo9g00514 284 SMART WRKY_cls 131 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo9g00514 284 Coils Coil 29 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00514 Pumo-Chr9 8221401 8223510 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00514 3 281 WRKY Transcription Factor Family AT1G80840 44.771 4.67e-72 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pumo9g00514 WRKY 5.3e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00514 - - gmx:100810978 471.855