Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00510 ATGGCATTGTTCAGGAAGTTCTTCTATAAGAAGCCCCCAGATGGGCTTCTAGAAATCACTGAAAGGGTTTATGTCTTTGATTACTGCTTTACCACGGATGTTATGGAAGAAGAAGAATATAGAGTGTATATAGGGGGAATAATTGGGCAACTTCGCGGTCACTTCCCTGATGCTTCATTTATGGTGTTCAACATGCGGGAGGGAGATAGCCAAAGCCAGATTTCAAACATTTTGTGCGACTATGATATGACTGTGATAGACTATCCTCGACAGTATGAAGGTTGCCCATTACTTACCATGGAGATGATACATCATTTCTTAAGATCAGGCGAAAACTGGCTTCAACTTGGGCAACAAAATATTGTCTTGATGCACTGTGAACGAGGTGGGTGGCCATTATTAGCATTTATGCTGGCTGCACTCTTGATTTATAGAAAGATGTTTACAGGGGAGCAGAAAACACTAGACATGATATACAAGCAAGCTCCTCGGGAACTTTTGCAGTTGATGTCACCGTTGAATCCATTACCTTCACAATTGAGGTATCTTCAGTACATATCAAGAAGAAATGTTGGTTCAGAATGGCCTCCTCTTGATAGGGCACTTACTTTGGACTGTGTAATTATAAGACTCATTCCTAATATGGGTGGAGAAGGTGGCTGCCGTCCTATATTTAGGATATATGGACAGGACCCTTTTATTCCTGCAGACCGAACTCCCAAAGTTCTCTTTTCAACTCCAAAAAAGAGCAAACTTGTCCGCTATTACAAGCAGTCTGATTGTGAACTGGTTAAGATTGACATCCATTGTCATGTTCAAGGTGATGTCGTTTTTGAGTGTATTCATCTGAACAGTGATTTAGAGCATGAAGAAATGATGTTTCGGGTGATGTTTAATACAGCATTCATAAGATCTAATATTTTGATGCTTAACCGTGATGAGATTGACATACTATGGAATGCTAAAGACTACTTCCCTAAAAATTTTAGAGTGGAGGTTCTTTTCTCAGATATGGATGCTTCGTCTTCTGTTATTTCAATTGATCTGCCTCATGTTGAGGAGAAAGAAGGCCTACCTGTTGAAGCATTTGCTAAGGTCAAGGAAATTTTCAGCAATGTGGACTGGTTAGATTCAAAGGCAGAGGTAGTAAGTGTGCTCCAACAGATCACAGCATCAAATATCCTTCTGGAAAGATTGGACAGTGGGGGTTCTTCTGCAACAAGTGGCTTGCAAAAGGAGTCATCTGGAAAATTTAAACTTGATTCAAAGGCACACAGTGATACAGAGAATCTGACTTCTGCAGTTCAGGAGAAACTTTCTACATCCTCCTTGGAATCATCTGTGGATGTTCTTATGGAAAATAAGACAGAACCATTAGAATCAAAGGCATCGTCAGAAAATAACGTTGAGACTCTTGAATGTTTAGGTCAGGGGAACCAACCTATTCCCTCATTTGGGCTCTCAACAGATTCAGATTCAACTAAAAAGGAGATTGAATTGTTAGAAACAAAACAATCATTGGAAAATGATACCAAGTTTACTGCATCTATGGCTCATGAGAGTCAATCTATCCCCTTAATTGAACCATCAATGGATGCAAATTTAATAAAAAAGGAGAGTGGATCATTAGAATCCAAGGAGAAGGATATTGAGTCATTAGCATCAAAGGCACTTACGAAAAATGACACCATGTCTCCTACATCTTTAGCTCAGGGGAAACAATCTGTTCCCTTAATTGAACCATCCACTGGTGCAGATTCATTGGAAAAGAAGACTGATTTGTTAGGGTCAAAGGAGAAAGCAATTGAATCACTAAACTCAGAGGCATTGTTGGAAAATGATAGCAGATTCAAATTTGAGCCAAAGCCACTTCCAGAAATTGATACAAGAAGTTCTACTTCTGAAGTTGAAGGGAAACTTTCTCTGTCCTCATTTGGATCATCTGTTAATGCTCCTATGGAAAAGAACAAAGATCCTCTAGACTTAAAGGCATCGCCAGAAGATAACATCAAGACTCTTGCTTCCATGAGTCAGGGGAAACAGCTTATTCCCTCATTAGGACTCTCAACAGATTCTAGTTCTACTGAAATGCCGATTGAATCATTAGAATCAAAGGCATCGGTGGAAAACGATACCAAGGTTTCTACATCTATGGCTCATGGGGAGCAGTCAATGCCCTTAATTGAACCATCAAAAGATGCAAATTCAATGAAACAGAAGATGGGACCATTAGAGTCAAAGGAAAAGGATACTGAATCATTAGAATCAAAGTCATCGTTGGAAAATGATACCAACTGTCCTCCATCTATGGCTCAGGGGAAACAATCTTTTCCCTTAATTCAACCATCAACTGATGCAAATTCAATGAAAAAGATGGGACAATTAGAACAAATGGTATTGCCAGAAAATGATGTCAAGAGTGTCACATCCACAGTTCAGAGGAAACAATATAGTCCCTTACCTGAGCCGCCTGTTGATGCAAACCTAATTAAAAAGAAGATTGAACCTCAAGAATTGCAGGTTGCGCTTCAGCTTCCCACTCAATCTAAAATAATTTCACCACGGGTGCGTCCAGCTATTCGATCTGCTTCAGCTTCTTATTTTAACTCCTTGCAAGGTTCACCTGTAGCTATATCAAGGTATCATAGTGCACCATCAGCTCTTGGAATAACATCTGTGTTGCAGGATCATTCACCAATGGATATCAAAGAAGTCACTCATGCAGTGACAGTATCTCCTCCGCCTTCTACTTTGCCTCCTTCAGACTCAAAGGTGCCAAATTCTATAGAGCCTAGTTCTACAATTGTTCCTCCAGCATCATCACCACCATTGAAAACTTCAGTTGATGCTCTTACTGCCATGGAAAAGACTTTTGGATCCTTTGCTCCTGCACCACCACCACCTCCTCCTCCTCAAAGTGAGCATACTTCAAAATTGATGCAATCTAATGTTACACAATACCCTGAAAATACAATGCATGATGAAGGTCAGAAATCATTGGTTAGGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCAACCCCATCTCTTTCTTCTCTGTCTGCCACAAAGAGCTCGTCTTTATCCCATCCTCCACCCCCTTCCCTTCCTGGAACATCACTTTCCACTGCCAAAGATTCATTTAAAGGTCCTCCTCCACCACCGCCTCCACCTACACCTCCATCTTCAACCAGTCAGGCTTCATCATCTCCAATACCTCCTCCTCCTCCTCCACTGTCTGGGTTTCCTTCTTCAGCTATGCCTGGCCCTCCTCCCCCACCTCCACCTCCTAGCCATTCTGGTTCTACTCCATCACCACCCCCTCCTCCAGCTTCTGCAAATGTTCCACCACCCCCACCTCCCCTTTCTGCCAACGGGTTGTCAAAACCTGCAGTTCCTGGACCACCTTCTGCTCCATTTGGTGCAAAGGGACGTGGAGGCCTGTTGCGAGCTAATCCAAAAGGTCAGTCTCAGACTAAAAGGAGCAATCTGAAACCTTACCATTGGTTAAAATTAACAAGGGCCATGCAAGGAAGCTTATGGGCTGAGACACAGAAACTAGATGAATTTTGTAGGGCTCCAGAATTTGACATGTCAGAACTTGAGACTTTGTTCTCTGCAGCTGCACCAAATCCTAATGATGGAAAAGGAGGAAAATCAAATCGCCGCCCCTCACAAAAAGTTGACAAAGTTCAATTGATTGAGCTCAGGCGGGCATATAACTGTGAGATCATGCTTACAAAGGTCAAAATCCCTTTGCCTGATTTGATGAGTGCTGTGCTTGCATTGGATGATTCAGTATTGGATGTCGATCAAGTTGAGAACCTCATAAAATTCTCTCCTACCAAAGAAGAGATGGAAACGCTCAAGAACTATAATGGGGATAAGGACAACTTGGGAAAGTGTGAACAGTTCTTCTTAGAATTAATGAAAGTGCCAAGAGTGGAAAACAAGCTAAGAGTTTTCGCTTTTAAGATGCAATTCTTATCCCAGGTTTCAGAGCTTAAAAGGGACTTGAATATTGTAAATAATGCATCTGAAGAGATAAGGAATTCAGTCAAGTTGAAAAGAATCATGCAGACCATTCTTTCTCTGGGTAATGCTTTGAACCATGGAACTGCAAGAGGTTCAGCTGTTGGGTTTCGATTGGATAGTCTCCTTAAACTCACTGATACACGAGCCAGAAACAGCAAGATGACTCTTATGCATTATCTTTGTAAGGTGCTTTCTGAAAAGCTTCCAGAACTTCTAGATTTTCACAAAGACCTAGGGAGTTTGGAGGCTGCAATCAAGATACAATTAAAATATTTGGCAGAGGAAATGCAAGCTGTTAGTAAAGGACTGGAGAAAGTAGTTCAGGAATTGACTGCATCAGAGAATGATGGACCTGTGTCAGAAAACTTCTGCCAGATTCTGAAGGAATTTCTTTCTTATGCTGAAGCTGAAGTGAGGTCTTTGGCTCAACTTTATGCCAATGTGGGTAGAAATGCAGATGCATTGGCTTTATACTTTGGCGAAGATCCAGCACGCGTCCCTTTTGAACAAGTTGTATCTACTCTCCTCAACTTTGTGAGAATGTTCATAAAAGCACATGAAGAAAATTGCAAGCAGATTGAATTAGATAAAAAGAGAGCAGAGAAGGAAGCAGAAAATGAGAAGTTGAAGCTAGCTGCTGCTAAAAAGGAGTCTGAACAGATGATAAGGCCAACCATAAAGAATGGGGACATTAAATGA 4731 0.4145 MALFRKFFYKKPPDGLLEITERVYVFDYCFTTDVMEEEEYRVYIGGIIGQLRGHFPDASFMVFNMREGDSQSQISNILCDYDMTVIDYPRQYEGCPLLTMEMIHHFLRSGENWLQLGQQNIVLMHCERGGWPLLAFMLAALLIYRKMFTGEQKTLDMIYKQAPRELLQLMSPLNPLPSQLRYLQYISRRNVGSEWPPLDRALTLDCVIIRLIPNMGGEGGCRPIFRIYGQDPFIPADRTPKVLFSTPKKSKLVRYYKQSDCELVKIDIHCHVQGDVVFECIHLNSDLEHEEMMFRVMFNTAFIRSNILMLNRDEIDILWNAKDYFPKNFRVEVLFSDMDASSSVISIDLPHVEEKEGLPVEAFAKVKEIFSNVDWLDSKAEVVSVLQQITASNILLERLDSGGSSATSGLQKESSGKFKLDSKAHSDTENLTSAVQEKLSTSSLESSVDVLMENKTEPLESKASSENNVETLECLGQGNQPIPSFGLSTDSDSTKKEIELLETKQSLENDTKFTASMAHESQSIPLIEPSMDANLIKKESGSLESKEKDIESLASKALTKNDTMSPTSLAQGKQSVPLIEPSTGADSLEKKTDLLGSKEKAIESLNSEALLENDSRFKFEPKPLPEIDTRSSTSEVEGKLSLSSFGSSVNAPMEKNKDPLDLKASPEDNIKTLASMSQGKQLIPSLGLSTDSSSTEMPIESLESKASVENDTKVSTSMAHGEQSMPLIEPSKDANSMKQKMGPLESKEKDTESLESKSSLENDTNCPPSMAQGKQSFPLIQPSTDANSMKKMGQLEQMVLPENDVKSVTSTVQRKQYSPLPEPPVDANLIKKKIEPQELQVALQLPTQSKIISPRVRPAIRSASASYFNSLQGSPVAISRYHSAPSALGITSVLQDHSPMDIKEVTHAVTVSPPPSTLPPSDSKVPNSIEPSSTIVPPASSPPLKTSVDALTAMEKTFGSFAPAPPPPPPPQSEHTSKLMQSNVTQYPENTMHDEGQKSLVRPPPPPPPPPPTPSLSSLSATKSSSLSHPPPPSLPGTSLSTAKDSFKGPPPPPPPPTPPSSTSQASSSPIPPPPPPLSGFPSSAMPGPPPPPPPPSHSGSTPSPPPPPASANVPPPPPPLSANGLSKPAVPGPPSAPFGAKGRGGLLRANPKGQSQTKRSNLKPYHWLKLTRAMQGSLWAETQKLDEFCRAPEFDMSELETLFSAAAPNPNDGKGGKSNRRPSQKVDKVQLIELRRAYNCEIMLTKVKIPLPDLMSAVLALDDSVLDVDQVENLIKFSPTKEEMETLKNYNGDKDNLGKCEQFFLELMKVPRVENKLRVFAFKMQFLSQVSELKRDLNIVNNASEEIRNSVKLKRIMQTILSLGNALNHGTARGSAVGFRLDSLLKLTDTRARNSKMTLMHYLCKVLSEKLPELLDFHKDLGSLEAAIKIQLKYLAEEMQAVSKGLEKVVQELTASENDGPVSENFCQILKEFLSYAEAEVRSLAQLYANVGRNADALALYFGEDPARVPFEQVVSTLLNFVRMFIKAHEENCKQIELDKKRAEKEAENEKLKLAAAKKESEQMIRPTIKNGDIK 1576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00510 1576 PANTHER FORMIN-J 1050 1563 - -
Pumo9g00510 1576 MobiDBLite consensus disorder prediction 758 785 - -
Pumo9g00510 1576 Coils Coil 588 608 - -
Pumo9g00510 1576 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 338 IPR035892 -
Pumo9g00510 1576 Gene3D Protein tyrosine phosphatase superfamily 12 191 IPR029021 -
Pumo9g00510 1576 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1228 1552 - -
Pumo9g00510 1576 MobiDBLite consensus disorder prediction 670 701 - -
Pumo9g00510 1576 Pfam C2 domain of PTEN tumour-suppressor protein 200 336 IPR014020 -
Pumo9g00510 1576 MobiDBLite consensus disorder prediction 975 993 - -
Pumo9g00510 1576 Pfam Formin Homology 2 Domain 1155 1526 IPR015425 -
Pumo9g00510 1576 MobiDBLite consensus disorder prediction 627 651 - -
Pumo9g00510 1576 MobiDBLite consensus disorder prediction 1000 1016 - -
Pumo9g00510 1576 MobiDBLite consensus disorder prediction 1047 1136 - -
Pumo9g00510 1576 Gene3D - 196 341 - -
Pumo9g00510 1576 MobiDBLite consensus disorder prediction 708 722 - -
Pumo9g00510 1576 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 187 IPR029021 -
Pumo9g00510 1576 MobiDBLite consensus disorder prediction 742 757 - -
Pumo9g00510 1576 SMART it6_source 1003 1574 IPR015425 -
Pumo9g00510 1576 MobiDBLite consensus disorder prediction 554 592 - -
Pumo9g00510 1576 SMART PTEN_C2_2 197 337 IPR014020 -
Pumo9g00510 1576 Gene3D Formin, FH2 domain 1148 1537 IPR042201 -
Pumo9g00510 1576 MobiDBLite consensus disorder prediction 907 1163 - -
Pumo9g00510 1576 MobiDBLite consensus disorder prediction 922 947 - -
Pumo9g00510 1576 MobiDBLite consensus disorder prediction 556 581 - -
Pumo9g00510 1576 MobiDBLite consensus disorder prediction 405 424 - -
Pumo9g00510 1576 ProSiteProfiles C2 tensin-type domain profile. 199 338 IPR014020 -
Pumo9g00510 1576 Coils Coil 1527 1565 - -
Pumo9g00510 1576 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1153 1552 IPR015425 -
Pumo9g00510 1576 MobiDBLite consensus disorder prediction 612 785 - -
Pumo9g00510 1576 Coils Coil 1331 1351 - -
Pumo9g00510 1576 MobiDBLite consensus disorder prediction 1206 1225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00510 Pumo-Chr9 8169623 8182582 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00510 1 402 FH2 protein (formin) Gene Family AT2G25050 72.208 0.0 659