Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00496 ATGCTTATTTGTTTCATTCAGATAGGAATGGGAACAAATCTCAGCACTCCCAAAACTGAAAAGTCTTCCGAGGATGGTGAAAATGACCTTCTTAGATATGGTTTATCATCTATGCAAGGCTGGCGTTCAACAATGGAAGATGCACATGCTGCACATCTTGATCTGGATGCGTCCACTTCCTTTTTTGGCGTTTATGATGGTCATGGAGGTAAGGTGGTTGCAAAGTTTTGTGCTAAGTATCTTCACCAGCAAGTGCTCAAGAATGAAGCATACATAGCTGGAGACATAGGAACCTCACTTCAGGAATCATTTTTCAGAATGGACGAGATGATGCGTGGTCAAAGGGGATGGAGGGAATTAGCAGTTTTGGGTGATAAGATGAACAAGTTTAATGGTAAGATAGAAGGGTTGATTTGGTCTCCACGAAGCAGAGATGGTAATAAGGAGCAAGATGATGCTTGGGCTTTTGAGGAGGGTCCTCATTCTAATTTTGCTGGACCAACTTCAGGAAGCACTGCCTGTGTTGCTATTATTAGAAACAACAAACTTTTTGTAGCAAATGCTGGTGATTCACGTTGTGTAATATGTAGGAAGGGTCAGGCGTATGATTTGTCTATAGATCATAAACCTGATCTTGAGATTGAGAAGGAAAGAATCTTAAAAGCTGGTGGTTTTATTCATGCAGGAAGAGTTAATGGGAGTTTAAGCCTTGCAAGAGCTATAGGTGACATGGAATTTAAGCAGAATAGATTCCTTTCTGCTGAAAAACAAATGGTGACAGCCAATCCAGACATAAAAACTATTGAACTTTGTGATGAAGATGAATTTATAGTGCTGGCTTGTGATGGCATATGGGATTGCTTGTCAAGCCAACAATTGGTAGATTTTGTACGTCAACAACTGCTCTTGGAAACTAAACTTTCTGCCGTTTGTGAAAGAGTATTAGATCGATGTTTGGCACCAACAATTACTGTTGGTGATGGATGTGATAACATGACCATGATTTTGGTGCTGTTCAAAAAACTGGCCCAATCAAGTGCACCTGCATAA 1050 0.4038 MLICFIQIGMGTNLSTPKTEKSSEDGENDLLRYGLSSMQGWRSTMEDAHAAHLDLDASTSFFGVYDGHGGKVVAKFCAKYLHQQVLKNEAYIAGDIGTSLQESFFRMDEMMRGQRGWRELAVLGDKMNKFNGKIEGLIWSPRSRDGNKEQDDAWAFEEGPHSNFAGPTSGSTACVAIIRNNKLFVANAGDSRCVICRKGQAYDLSIDHKPDLEIEKERILKAGGFIHAGRVNGSLSLARAIGDMEFKQNRFLSAEKQMVTANPDIKTIELCDEDEFIVLACDGIWDCLSSQQLVDFVRQQLLLETKLSAVCERVLDRCLAPTITVGDGCDNMTMILVLFKKLAQSSAPA 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00496 349 CDD PP2Cc 32 339 IPR001932 -
Pumo9g00496 349 SMART PP2C_4 22 337 IPR001932 -
Pumo9g00496 349 ProSitePatterns PPM-type phosphatase domain signature. 61 69 IPR000222 GO:0043169
Pumo9g00496 349 ProSiteProfiles PPM-type phosphatase domain profile. 32 339 IPR001932 -
Pumo9g00496 349 Pfam Protein phosphatase 2C 32 112 IPR001932 -
Pumo9g00496 349 Pfam Protein phosphatase 2C 163 322 IPR001932 -
Pumo9g00496 349 PANTHER PROTEIN PHOSPHATASE 2C 24 337 IPR015655 GO:0004722|GO:0006470
Pumo9g00496 349 SMART PP2C_SIG_2 37 339 IPR001932 -
Pumo9g00496 349 SUPERFAMILY PP2C-like 13 341 IPR036457 -
Pumo9g00496 349 Gene3D - 9 340 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00496 Pumo-Chr9 8003228 8009688 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00496 10 341 PP2C-type Phosphatase Gene Family AT2G25070 77.711 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00496 K17499 - gmx:100793667 647.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00496 9 8003228 8009688 Pumo9g00496 9 8003228 8009688 ECH
Pumo9g00496 9 8003228 8009688 Pumo10g00166 10 2387116 2394378 PCT