Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00489 ATGGGTACCTTGCCCCCAGAATACATCAACGGAGGTAGGGCTAGCAAGGAATCAGACATTTATAGTTTTGGGGTTGTGGCTCTTGAAATTGCATGTGGAAGGAGGACTTACCAAGATGGGGAGTATCATGTGCCTCTCGTGGACTGGGTGTGGCAACTGTATGTGGAAGGGAATATCCTAGATGTTGTTGATGAGAGATTGAACAAGGAGTTTGATGTGGATGAAATGACAAGCTTGATCACCGTGGGGTTGTGGTGTACTAACCCAAACAACAAGGAAAGGCCCAAAGCTGCACAGGTAATAAAAGTTCTTCAACTTGAAGCGCCATTACCAGTGCTTTCACTTGATATGCATGACCGTCCTCCTCCTTCTCTAATTAAGCATGTGCAACGACCCACTTATTATTCCTCACAATCACTACCCTTCACTAACAGCCTTGCAAGTGTTGGACGTTAA 456 0.4539 MGTLPPEYINGGRASKESDIYSFGVVALEIACGRRTYQDGEYHVPLVDWVWQLYVEGNILDVVDERLNKEFDVDEMTSLITVGLWCTNPNNKERPKAAQVIKVLQLEAPLPVLSLDMHDRPPPSLIKHVQRPTYYSSQSLPFTNSLASVGR 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00489 151 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 3 111 - -
Pumo9g00489 151 Gene3D Transferase(Phosphotransferase) domain 1 1 118 - -
Pumo9g00489 151 Pfam Protein tyrosine and serine/threonine kinase 5 102 IPR001245 GO:0004672|GO:0006468
Pumo9g00489 151 SUPERFAMILY Protein kinase-like (PK-like) 4 131 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00489 Pumo-Chr9 7791935 7792390 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00489 1 112 Receptor kinase-like Gene Family AT5G55830 47.414 5.77e-30 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pumo9g00489 PK_Tyr_Ser-Thr 4.5e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00489 - - gmx:100784490 249.98