Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00488 ATGTTGGCTAGCTCGGCATGTTTCCACTACTTGAAAACTTCTCTTCTTTTGTGCTTGCTTATGATTCTTCCAATAGTTGAACCACTTTCCTTCAACATAACTGATTTTAAAGATACTGAAAGCACAAGCCTCATATTTGGAGGCGAAACCAAGATTCAGAACGGAGCCATAATGCTCAACTCACTTCTCAACAACTACAACTTTGGAGTTGGACGAGCCGTGTATGGCCAACCTCTGCGCTTCAAAGACTCTTCTAACGGACATGTCCCCGACTTTTCTACTCGCTTTTCGTTCACTATTGATGTGTCCAATAACACCCAGATGGCTGACGGCTTTGCCTTCTACGTGGGACCCGCTTCCTACCAATTTCCGGCCTATTCATATGGTTACAGTCTCGGCCTATACGATGACAACGCACCCCGTAATAACATCGTTGCTGTCGAATTTGACACTTTTGCAAACGACAATTTGGATCCAACAATGCGGCACGTGGGGATCAACCTCAACTCTGCGAAATCCCTCGCTACTACCAGGTTTGATATTGAGAGCAACATAGGGAAGATGGTGCATGCCTTGATAACTTACAATGCTTCAGCCAAACTCCTTGCTGTCTCATGGTTCTTTGAGGGAACTAGTTCTGGTTTTACGCCTAACGCTTCTTTTTCACACCACATTGACCTAGGGGAAATTCTACCAGAGTGGGTGACTGTTGGGTTTTCGGGTGCAACCGGGTCGGTGACAGAAGAGGAAAATGTTATTCATTCCTGGGAATTCACTTCAACTCTGGATCTAAACTCCACGCATCTAGAGGTGAACAAAGAAAATAATGACATCGTAACCAAATACAAGTTTCAAGTTAAAGTAGTAGTTGTTGCAGGGACTTGTTCTATTGTTTTTGTGGTTGTGGTTCTTTGTGTTTCTTGGTTGATCATCAAGAAGAGAAGAAGGGAGGATGGTTTTGATTTGGATAGAAGAGCTATGTCTAGAAGGTTTGGCTATAACGAATTAGTTGCAGCCACCAACGGGTTTGCAGATAATAGAAGGCTTGGAGAAGGTGGCTATGGACAAGTTTACAAAGGGGTTCTGAGTGATTTAGGGCGCGTGGTTGCGGTGAAAAGGATATTTTCTGATGTTGAAGATTCAGAGAGAATATTTATAAACGAGGTGAAGATTATAAGTCGTCTTATGCATAGAAACCTTGTGCAATTCATGGGGTGGTGCCACGAGGAAGGACAGTTATTACTGGTTTTCGAGTTCATGGTTAATGGAAGCCTTGACACTCATCTCTTTGGCAACAGAAGAACTTTGACATGGGATGTGAGATACCAGATAGCGTTAGGTGTGGCTAGAGCACTTCGTTATCTTCATGAAGATGCCGAGCAGTGTGTTCTTCATAGGGATATTAAGTCAGGTAATGTTTTGTTAGACACAGATTTCAATACTAAGCTTAGTGACTTTGGGATGGCAAAATTTGTGGATCCAAGATTGAGGACTCAGAAGACAAAGGTGGTGGGGACATATGGGTACCTGGCCCCAGAATATGTAAAGGAAGGAAGGGCCAGCAAAGAATCAGACATTTATGGTTTTGGGGTTGTGGCTTTGGAGATAGCATGTGGAAGGAGGACTTACCAGGATGGGGAGTATAATCATGTGCCTTTGACGAATTGGGTATGGAAACTTTATGAGGAAGGGAATATTTTGAATGCTGCTGATGAGGGATTGAAGGGGGATTTTGATGTGAATGAAATGACATGCTTGCTCACTGTGGGAATATGGTGTACTCACCAAGACCACAAGGAAAGGCCAAAGGCAGAACAGGTTATTAATGTTCTTAAACAAGAAGCATCATTGCCAATGCTCTCTACATAA 1869 0.4318 MLASSACFHYLKTSLLLCLLMILPIVEPLSFNITDFKDTESTSLIFGGETKIQNGAIMLNSLLNNYNFGVGRAVYGQPLRFKDSSNGHVPDFSTRFSFTIDVSNNTQMADGFAFYVGPASYQFPAYSYGYSLGLYDDNAPRNNIVAVEFDTFANDNLDPTMRHVGINLNSAKSLATTRFDIESNIGKMVHALITYNASAKLLAVSWFFEGTSSGFTPNASFSHHIDLGEILPEWVTVGFSGATGSVTEEENVIHSWEFTSTLDLNSTHLEVNKENNDIVTKYKFQVKVVVVAGTCSIVFVVVVLCVSWLIIKKRRREDGFDLDRRAMSRRFGYNELVAATNGFADNRRLGEGGYGQVYKGVLSDLGRVVAVKRIFSDVEDSERIFINEVKIISRLMHRNLVQFMGWCHEEGQLLLVFEFMVNGSLDTHLFGNRRTLTWDVRYQIALGVARALRYLHEDAEQCVLHRDIKSGNVLLDTDFNTKLSDFGMAKFVDPRLRTQKTKVVGTYGYLAPEYVKEGRASKESDIYGFGVVALEIACGRRTYQDGEYNHVPLTNWVWKLYEEGNILNAADEGLKGDFDVNEMTCLLTVGIWCTHQDHKERPKAEQVINVLKQEASLPMLST 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00488 622 ProSitePatterns Legume lectins alpha-chain signature. 231 240 IPR000985 -
Pumo9g00488 622 CDD lectin_legume_LecRK_Arcelin_ConA 29 262 IPR001220 GO:0030246
Pumo9g00488 622 Gene3D Phosphorylase Kinase; domain 1 328 419 - -
Pumo9g00488 622 Pfam Protein kinase domain 344 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g00488 622 ProSiteProfiles Protein kinase domain profile. 343 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g00488 622 SUPERFAMILY Concanavalin A-like lectins/glucanases 28 268 IPR013320 -
Pumo9g00488 622 FunFam L-type lectin-domain containing receptor kinase IX.1 420 621 - -
Pumo9g00488 622 PANTHER - 60 614 - -
Pumo9g00488 622 SUPERFAMILY Protein kinase-like (PK-like) 328 611 IPR011009 -
Pumo9g00488 622 Gene3D - 27 285 - -
Pumo9g00488 622 ProSitePatterns Legume lectins beta-chain signature. 145 151 IPR019825 -
Pumo9g00488 622 Gene3D Transferase(Phosphotransferase) domain 1 420 621 - -
Pumo9g00488 622 ProSitePatterns Protein kinases ATP-binding region signature. 349 372 IPR017441 GO:0005524
Pumo9g00488 622 SMART serkin_6 343 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g00488 622 Pfam Legume lectin domain 29 265 IPR001220 GO:0030246
Pumo9g00488 622 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Pumo9g00488 622 FunFam L-type lectin-domain containing receptor kinase IX.1 328 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00488 Pumo-Chr9 7788481 7817301 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00488 15 622 Receptor kinase-like Gene Family AT5G10530 42.247 4.67e-162 477
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pumo9g00488 Pkinase 7e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00488 - - gmx:100800327 943.725