Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00482 ATGATAATCAATGGATGCATGATGATCTTGAGTCGTTTGCTTCTGAGAATTGTCTCAAACCAGGCCCATCAAGCCAGTAATGTAGGTGAGTTTGGAGGAGGAAGCAGCCACTTTGATGGGTCTTCTAGCAGAGATACTAGCAGTGGACGTGAGAGAAGGGAAGTTGTTAGAGAGAGAGTTGCATTCAAAACAATGTCAGAGATTGAAGTACTTGACGATGGCTACAGATGGAGGAAGTACGGAAAGAAAATGGTGAAAAACAGTCCCAATCCAAGGAATTACTATAGGTGTTCAGTGGATGGATGCAATGTGAAAAAGAGAGTGGAGAGAGACAAGGATGACCCAAGGTATGTAATAACAACCTATGAAGGCAACCACACTCATCCAAGTTCTTCCTAG 399 0.4311 MIINGCMMILSRLLLRIVSNQAHQASNVGEFGGGSSHFDGSSSRDTSSGRERREVVRERVAFKTMSEIEVLDDGYRWRKYGKKMVKNSPNPRNYYRCSVDGCNVKKRVERDKDDPRYVITTYEGNHTHPSSS 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00482 132 FunFam WRKY transcription factor 57 57 131 - -
Pumo9g00482 132 Gene3D WRKY domain 58 124 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo9g00482 132 ProSiteProfiles WRKY domain profile. 66 131 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo9g00482 132 MobiDBLite consensus disorder prediction 29 43 - -
Pumo9g00482 132 Pfam WRKY DNA -binding domain 72 129 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo9g00482 132 SMART WRKY_cls 71 130 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo9g00482 132 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 46 130 IPR044810 GO:0003700
Pumo9g00482 132 MobiDBLite consensus disorder prediction 29 53 - -
Pumo9g00482 132 SUPERFAMILY WRKY DNA-binding domain 63 130 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00482 Pumo-Chr9 7481604 7483229 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00482 59 130 WRKY Transcription Factor Family AT5G26170 81.944 3.84e-42 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pumo9g00482 WRKY 1.2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00482 - - gmx:100796836 182.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00482 9 7481604 7483229 Pumo9g00482 9 7481604 7483229 ECH