Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00472 ATGCCTGCTGGAGGCGTCGCTTCCGCTATGGCAGCGCAATTGGTGTGGACCCCAGTTGATGTCGTGAGCCAGAGACTCATGGTCCAAGGAAGTAACGAAATGTGTTACAGGAATGGTTTTGATGCATTCAGGAAAATTCTGGGTGTTGATGGACCAAGAGGGTTCTACAGAGGCTTTGGAGTTTCAATAGTGACTTATGCACCCTCTAATGCGGTTTGGTGGGCTTCGTATTCGATGGTAAATAGGGTTATTTGGGGCGCGTGTGGTGGTTGTGATTCTAAGGCGATGGTGGGAGTGCAAGGGTTGAGTGCGGTTATGGCTAGTGGAGTCTCAGCTATTGTGACAATGCCACTTGACACGATCAAGACGAGGTTGCAAGTGTTGGATGCTGAGGAGAATGGACGAAGGAGGCCACTGACACTTGCGCAGGCTGTTCGGAATTTGGTGAGGGAAGGGGGGATTTTGGCTTGTTACAGAGGGTTGGGACCAAGGTGGGCGTCAATGTCTATGTCTGCTGCGACCATGATCACTACCTATGAGTTCTTGAAACGCGTGTCTGCTAAGAATATTGACAGATTAACGGTGTAG 588 0.5 MPAGGVASAMAAQLVWTPVDVVSQRLMVQGSNEMCYRNGFDAFRKILGVDGPRGFYRGFGVSIVTYAPSNAVWWASYSMVNRVIWGACGGCDSKAMVGVQGLSAVMASGVSAIVTMPLDTIKTRLQVLDAEENGRRRPLTLAQAVRNLVREGGILACYRGLGPRWASMSMSAATMITTYEFLKRVSAKNIDRLTV 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00472 195 Gene3D Mitochondrial carrier domain 2 192 IPR023395 -
Pumo9g00472 195 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 3 189 - -
Pumo9g00472 195 Pfam Mitochondrial carrier protein 100 188 IPR018108 -
Pumo9g00472 195 Pfam Mitochondrial carrier protein 4 84 IPR018108 -
Pumo9g00472 195 SUPERFAMILY Mitochondrial carrier 4 182 IPR023395 -
Pumo9g00472 195 ProSiteProfiles Solute carrier (Solcar) repeat profile. 95 185 IPR018108 -
Pumo9g00472 195 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1 83 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00472 Pumo-Chr9 7400446 7402274 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00472 3 189 Chloroplast and Mitochondria Gene Families AT5G26200 65.025 7.66e-90 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00472 K15121 - gmx:100797365 350.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00472 9 7400446 7402274 Pumo9g00472 9 7400446 7402274 ECH
Pumo10g00231 10 3097096 3099045 Pumo9g00472 9 7400446 7402274 ECH