Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00469 ATGACTCCATTTGAGTTTGACAAAGTTGGGAGCATAGACAAAGTTGGATTTAAATTAATAATAAAGATGAGTTTCAAGGACAGCCCTAAAACTCCTCCATACCTGTCTAGCCAATCATCCAATTCTAGTTTTGTGGCCAAACCACAGAAGAATGTGGAGCCACCAAGCCCTTCACCTGTTGGATGCTGCGGAGGCTTCAGCAGTGTCAAGACTACGGGGTCCTCTGCCTCCAAATCACAACAAAATAAGCAGCAGCTACAATACCAAAGGCTTGAAGTAAAGGTGGCAGATTTGGAGAAGGAAGTGCAAAAACAAGCAGAACTACGAGTAATGTACAAGAAAAGAATGGAAAGGACTCAAGATTACTTGAGGTACTGCCTTCAGATAGCACAGGAAAATGGAGTATTAGATCTCATTGTGAACTGCAAAGGTGAACTTCAACAATCTCCACTCTCTGTCCACACCACTGTCAGCTCCAATATTACCAGCCCTCAAATTCAAATTCCCACCCCACCACACCATGGCCACCACCCCAATCTAGCACCCATTATTGATCAAGCAAAAATCAATGGATGGTATATTGATCCAAATGAGATTCAATTGGAAGAGAAAATCGGGCAAGGAAGCACCGCAGAGATTCACAGAGGAACATGGCGTGGATTTGAGGTGGCAGTGAAGTGCATATCCCAAGAGTTCTTCCGCACAAACCAAAACGGCGTCGCTTACTTCTCCCAGGAGCTCGAAACGCTGTCGCGGCAGCGCCACAGGTTCGTGCTTCAGCTCATGGGCGCGTGCATCGACCCTCCCCGGCGCGCGTGGGTGGTCACGGAGTATCTGGGCAGCAACGCTGAAGGAGTGGCTCCACGGGCCTGGGAACAGGCGCAGAGAGCGAATGGTGCCACTTCCACCCTTCAAGGACAGAGTTATTAG 930 0.4839 MTPFEFDKVGSIDKVGFKLIIKMSFKDSPKTPPYLSSQSSNSSFVAKPQKNVEPPSPSPVGCCGGFSSVKTTGSSASKSQQNKQQLQYQRLEVKVADLEKEVQKQAELRVMYKKRMERTQDYLRYCLQIAQENGVLDLIVNCKGELQQSPLSVHTTVSSNITSPQIQIPTPPHHGHHPNLAPIIDQAKINGWYIDPNEIQLEEKIGQGSTAEIHRGTWRGFEVAVKCISQEFFRTNQNGVAYFSQELETLSRQRHRFVLQLMGACIDPPRRAWVVTEYLGSNAEGVAPRAWEQAQRANGATSTLQGQSY 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00469 309 MobiDBLite consensus disorder prediction 27 59 - -
Pumo9g00469 309 ProSiteProfiles Protein kinase domain profile. 199 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g00469 309 SUPERFAMILY Protein kinase-like (PK-like) 169 280 IPR011009 -
Pumo9g00469 309 Gene3D Phosphorylase Kinase; domain 1 187 279 - -
Pumo9g00469 309 MobiDBLite consensus disorder prediction 30 49 - -
Pumo9g00469 309 ProSitePatterns Protein kinases ATP-binding region signature. 205 226 IPR017441 GO:0005524
Pumo9g00469 309 Coils Coil 81 115 - -
Pumo9g00469 309 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 66 280 - -
Pumo9g00469 309 Pfam Protein tyrosine and serine/threonine kinase 199 280 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00469 Pumo-Chr9 7332104 7335021 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00469 190 280 MAP Kinase Kinase Kinase AT2G17700 35.165 9.50e-13 66.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-8 Pumo9g00469 PK_Tyr_Ser-Thr 1.1e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00469 - - gmx:102666416 402.519
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00469 9 7332104 7335021 Pumo9g00469 9 7332104 7335021 ECH