Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00468 ATGGCTCTCACCGGAGAAACAGGAACATATGTATACATGGCACCAGAGGTGATTCGATGTGAACCGTATAATGAAAAGTGTGATGTGTACAGTTTTGGGGTCATATTGAACGAGATTCTAACCGGAAATTACCCGTACATTGAGACAAATTATGGTCCCACCAAGATTGCCATGGAAGTTGTGGAGGGTAAGCTGCGACCTAAGCTTCCGTGTGATGATGTTGACCAACTAGGAGAGCTTATTGACCTTATTTGCCTTTGCTGGGACAAAGATCCATCTACTCGACCATCCTTCGCCACAATCACCCTTTGCCTCAAAAGTTATGCTAAGAAGAATCTCCTTTAA 345 0.4377 MALTGETGTYVYMAPEVIRCEPYNEKCDVYSFGVILNEILTGNYPYIETNYGPTKIAMEVVEGKLRPKLPCDDVDQLGELIDLICLCWDKDPSTRPSFATITLCLKSYAKKNLL 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00468 114 Gene3D Transferase(Phosphotransferase) domain 1 2 113 - -
Pumo9g00468 114 Pfam Protein tyrosine and serine/threonine kinase 9 103 IPR001245 GO:0004672|GO:0006468
Pumo9g00468 114 ProSiteProfiles Protein kinase domain profile. 1 109 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g00468 114 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 4 102 - -
Pumo9g00468 114 SUPERFAMILY Protein kinase-like (PK-like) 3 102 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00468 Pumo-Chr9 7330758 7331948 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00468 3 101 MAP Kinase Kinase Kinase AT4G35780 45.455 1.08e-24 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-8 Pumo9g00468 PK_Tyr_Ser-Thr 1.9e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00468 - - gmx:100794498 231.876