Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00457 ATGAATCTGCGCCACGGCTCCAAGGTTTGGCTCGAAGACCGGGATTCGGCCTGGCTCGCCGCCGAAGTCCTCGATTCCGACGGTAACCGCCTCTTGCTCCTCACTGATTCCGCCAAGAAGGTTTATGCCTCGCCGGAGAAACTGTTACCGAGGGATGCGGATGAAGAGGAGCATGGGGGATTCGAAGATATGACGAGGTTGGCGTACTTGAACGAGCCGGGAGTGTTGTTCAATCTTCGGAGGAGATATTTGCTCAATGATATCTATACATATACAGGGAGCATTTTAATAGCTGTTAATCCCTTCACGAAGCTTCCCCATTTATATGATTCCCATATGATGGAGCAATATAAGGGAGCTCCATTGGGTGAGCTTAGCCCACATGTTTTTGCAGTTGCTGATGCATCTTATAGAGCAATGATGAATGAAGGTAAAAGTCAATCTATCTTGGTCAGCGGTGAAAGTGGTGCTGGAAAAACTGAGACAACAAAATTGATTATGCAATATCTTACCTTTGTCGGTGGACGTGCTGCTGGTGATGATAGAACAGTTGAACAGCAAGTTCTTGAATCCAATCCACTCTTAGAGGCATTTGGTAATGCAAGGACTGTTAGGAATGACAATTCAAGTCGTTTTGGGAAGTTTGTTGAAATTCAGTTTGATTCAAATGGTAGAATATCTGGTGCTGCAATTAGAACTTACTTACTGGAAAGATCACGAGTAGTGCAGATAACGGATCCAGAGAGAAATTATCACTGCTTTTATCAGTTGTGTGCATTTGAAAGGGATGCAGAGAAGTATAAGTTAGGACATCCAAGTCACTTCCACTATCTAAATCAAAGTAAAGTCTATGAATTAGATGGTGTAAGCAATGCCGAAGAATACCTGAAGACGAGGAGGGCAATGGATATTGTTGGCATCAGTCACGAGGATCAGGAAGCCATATTTCGTGTCTTAGCGGCAATTTTACATTTGGGAAACATTGAATTTTCTCCTGGAAAAGAGCATGACTCGTCGGTAGTAAAGGATGAAAAATCAAGATTTCATATGCAGATGGCTGCTGATCTTTTCATGTGTGATGTAGACCTACTGCTGGCAACATTGTGTACTCGTTCAATACAAACTCGTGAAGGAAGTATTGTCAAGGCCCTTGATTGCAATGCTGCTGTTGCTGGCCGTGATGTTTTGGCAAAAACTGTTTACGCCCGTTTATTTGATTGGCTTGTAGATAAGATCAATAGGTCTGTTGGGCAAGACATCAATTCCAAGATACAGATTGGAGTTTTGGATATTTATGGTTTTGAGTGCTTTAAGGATAATAGTTTTGAGCAATTCTGCATCAATTTTGCAAACGAAAAGCTTCAGCAACATTTTAATGAGCATGTATTCAAGATGGAGCAGGAGGAGTATGGCAAAGAAGAAATTGACTGGAGTTACATTGAATTTGTAGATAACCAAGATGTTTTAGATTTAATTGAAAAGAAACCCATTGGTATCATTGCTCTGTTGGACGAAGCTTGTTTGTTTCCAAAGTCGACACATGAAACATTCTCAACCAAGTTGTTTCAGCATTTTCGCTCTCACCCTAGGTTGGGAAAGGAAAAATTTTCACAAACTGATTTTGCCATTTCTCATTATGCTGGAAAGGTCACTTATCATACAGATACCTTTTTAGACAAAAATCGTGATTATGTTGTAGTAGAGCATTGTAACCTATTATCTTCTTCAAAATGCCCTTTTGTTTCTGGTCTTTTTCCTTTGCTACCAGAAGAATCTTCAAGATCATCATACAAGTTTTCTTCAGTAGCTGCCAGATTTAAGCAACAACTTCAAGCACTAATGGAGACCCTAAACTTGACAGAGCCTCATTACATACGATGTGTGAAACCAAATTCTTTGAATCGACCACAAATATTTGAAAATGCAAGCGTCATACACCAGTTACGCTGTGGGGGTGTCCTTGAAGCTGTTCGGATAAGTCTGGCAGGTTATCCCACTCGAAGAACTTACTCAGAGTTTGTAGATCGCTTTGGGTTAATAGCCCCTGAATTTATGGATGGAAGTTGGGTAGGACCAAAGTATTTCTTAGGGCTGGCCAAATTGGTATTTTGGACTCAAGTACGTGCTGAAGTTTTAGACAATGCTGCAAAGTGTATTCAGCGCCGACTGAGGACATTTATTGCACACAGGGATTTCATCTTAGCCAGAGCTGCTGCATTTTCTCTTCAGGCATGCTGCAGGGGATACATTGCCCGAAAGATATATGCTGCTAAAAGGGACACAGCAGCGGCTATCTCTATTCAGACATATATTCGTATGTGGCTTACGAGGCATGCTTACTTCAAACTGTATTTTTCTTCTATTATCATACAATCCCATGTTCGAGGTTTTGTGACTCGCCAAAGATTTTTACATGGAAAAGAACATAGAGCTGCTACTTTTATTCAGGCCTGTTGGAGGATGTCCAAGGTTAGGTCATCTTTCTGGCGACATCAAGCTTCAATTGTGGCAATACAATGCCTTTGGCGGTGTAGACAAGCAAAAAGAGAGCTACGTAGACTTAAACAAGAGGCAAATGAAGCTGGTGCCCTCCGTTTAGCTAAGAATAAACTGGAGAAGCAATTGGAAGAGCTCACATGGCGTTTGCATCTTGAAAAGAAAATAAGGGTTTCTAATGAAGAGGCTAAGAAAATAGAGATTTCCAAACTTCAAAAGATGTTAGAAGCTCTGAATCTTGAATTAGATGCAGCTAAATTGGCAAAAATTAATGAGTGCAACAAGAATGCTGTTCTGCAAAATCAATCGGAATTGTCAGTAAAGGAAAAGTCCGCTTTAAAAAGAGAGCTAGTTGCAGTGGATGAATTACGAAAGGAAAATGCTCTGTTAAAGGCTTCATTGGATGCATTTGAAAAGAAGTACGCAACCTTGGAGCTTGAGCTTATGAATGCTCAAAAAGGCCGGGATGAAACCATGGAGAAACTGAGAGAGTATGAACAGAAGTGCTCTCAACTCGAGCAAACTGTGAAAAGGCTTGAGGAAAAGCTATTGAGTTTAGAGGATGAAAATCATGTTCTTCGTCAGAAAGCCTTAAGTACCCCTCTTAAGAGTAGCCGTCCAGGTTTTGCCAAGTCAATATCAGAAAAATACTCAAGTGCAATCGCCTCCCGCACTGAACGAAAGACCATATTTGAGTCACCCACTCCCACAAAACTTATTGCCCCCTTTGCACTAGGCTTGTCAGACTCTCGTCGATCTAAGTTAACAGCAGAGAGGCAGCAGGATAACTATGAATTCCTCTCTAAATGCATAAAAGAAAATTTGGGATTCAAAAATGGTAAACCTATTGCAGCTCGTATTATATACAAATGTCTACTTCATTGGCATTCATTTGAATCTGAGCGCACAACCATTTTTGATTCCATAATCGAAGGCATAAATGAGGTTATAAAGGTTAGGGAGGATGACATCATCCTACCATATTGGCTGTCCAATGCCTCCGCACTTCTATGCCTTTTACAGAGGAACTTACGTTCAAATGGCTTTTTATCTACCACTGCTCAACGTTATCCTGGATCATCATGGTTTGACCAGCCGGACTGGGCATCTTTTGCTTTTGAAAAGCTTGTTGACATTATAGCAATTATGACTACCAAAAGAAAGGGACCAAAATCTCCATTAAAGTTTATTGGATATGATGATGGTGTATCCCATGTGGAGGCGAGATATCCTGCTATACTTTTTAAGCAACAACTAACTGCTTGTGTAGAGAAGATTTTTGGTCTTCTACGTGACAATTTGAAAAAGGAGCTTTCTCCACTTCTGGGATCATGTATTCAGGCACCCAAAACAGGACGAGGAGTGCATGGGGGAAAATCATCTAGATCTCCTGGTGGGATTCCCCAACAATCATCTGTTGGTCAGTGGAGTAACATTGTCAAATTTTTGGATTCACTCATGAGCAAACTTCGTGAAAATCATGTGCCATCCTTCTTCATCCGTAAGCTAGTTACCCAGGTGTTTTCCTTCATCAATATTACACTCTTCAACAGTCTTCTTTTGCGTCGGGAATGTTGCACTTTCTCAAATGGTGAATATGTGAAGTCTGGTCTAGCAGAACTGGAGAAATGGATAGTCAATGCAACGGAGGAGTATGCAGGGACATCCTGGCATGAGCTGAATTATATACGACAAGCTGTCGGGTTCTTGGTAATACATCAGAAGAGGAAGAAATCTTTGGAAGAGATTCGGAAAGATCTTTGTCCGGTATTGACTGTGAGGCAAATCTATCGAATCAGCACGATGTACTGGGATGACAAGTATGGAACCCAAAGTGTGTCCAATGAGGTTGTTAGTGAAATGAGAGAAATTCTCAGCAAGGACAATCAGAATCTGACCTCAAATTCTTTCTTATTGGATGATGATCTGAGCATTCCTTTCTCTGCTGAAGACATAGATATGGCAATTCCTGCCATAGATCTTGATGAGATTGATCTTCCAGAATTCGTGTCTGAATATTCTTGCGCTCAGTTTCTTAGTTCACATCAGAAGTAA 4551 0.41 MNLRHGSKVWLEDRDSAWLAAEVLDSDGNRLLLLTDSAKKVYASPEKLLPRDADEEEHGGFEDMTRLAYLNEPGVLFNLRRRYLLNDIYTYTGSILIAVNPFTKLPHLYDSHMMEQYKGAPLGELSPHVFAVADASYRAMMNEGKSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAGDDRTVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDSNGRISGAAIRTYLLERSRVVQITDPERNYHCFYQLCAFERDAEKYKLGHPSHFHYLNQSKVYELDGVSNAEEYLKTRRAMDIVGISHEDQEAIFRVLAAILHLGNIEFSPGKEHDSSVVKDEKSRFHMQMAADLFMCDVDLLLATLCTRSIQTREGSIVKALDCNAAVAGRDVLAKTVYARLFDWLVDKINRSVGQDINSKIQIGVLDIYGFECFKDNSFEQFCINFANEKLQQHFNEHVFKMEQEEYGKEEIDWSYIEFVDNQDVLDLIEKKPIGIIALLDEACLFPKSTHETFSTKLFQHFRSHPRLGKEKFSQTDFAISHYAGKVTYHTDTFLDKNRDYVVVEHCNLLSSSKCPFVSGLFPLLPEESSRSSYKFSSVAARFKQQLQALMETLNLTEPHYIRCVKPNSLNRPQIFENASVIHQLRCGGVLEAVRISLAGYPTRRTYSEFVDRFGLIAPEFMDGSWVGPKYFLGLAKLVFWTQVRAEVLDNAAKCIQRRLRTFIAHRDFILARAAAFSLQACCRGYIARKIYAAKRDTAAAISIQTYIRMWLTRHAYFKLYFSSIIIQSHVRGFVTRQRFLHGKEHRAATFIQACWRMSKVRSSFWRHQASIVAIQCLWRCRQAKRELRRLKQEANEAGALRLAKNKLEKQLEELTWRLHLEKKIRVSNEEAKKIEISKLQKMLEALNLELDAAKLAKINECNKNAVLQNQSELSVKEKSALKRELVAVDELRKENALLKASLDAFEKKYATLELELMNAQKGRDETMEKLREYEQKCSQLEQTVKRLEEKLLSLEDENHVLRQKALSTPLKSSRPGFAKSISEKYSSAIASRTERKTIFESPTPTKLIAPFALGLSDSRRSKLTAERQQDNYEFLSKCIKENLGFKNGKPIAARIIYKCLLHWHSFESERTTIFDSIIEGINEVIKVREDDIILPYWLSNASALLCLLQRNLRSNGFLSTTAQRYPGSSWFDQPDWASFAFEKLVDIIAIMTTKRKGPKSPLKFIGYDDGVSHVEARYPAILFKQQLTACVEKIFGLLRDNLKKELSPLLGSCIQAPKTGRGVHGGKSSRSPGGIPQQSSVGQWSNIVKFLDSLMSKLRENHVPSFFIRKLVTQVFSFINITLFNSLLLRRECCTFSNGEYVKSGLAELEKWIVNATEEYAGTSWHELNYIRQAVGFLVIHQKRKKSLEEIRKDLCPVLTVRQIYRISTMYWDDKYGTQSVSNEVVSEMREILSKDNQNLTSNSFLLDDDLSIPFSAEDIDMAIPAIDLDEIDLPEFVSEYSCAQFLSSHQK 1516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00457 1516 Gene3D Kinesin motor domain 62 659 IPR036961 -
Pumo9g00457 1516 Coils Coil 844 888 - -
Pumo9g00457 1516 Coils Coil 893 920 - -
Pumo9g00457 1516 Gene3D Myosin VI head, motor domain, U50 subdomain 308 598 - -
Pumo9g00457 1516 CDD MYSc_Myo11 73 688 IPR036018 -
Pumo9g00457 1516 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 807 858 IPR027417 -
Pumo9g00457 1516 ProSiteProfiles IQ motif profile. 735 764 IPR000048 GO:0005515
Pumo9g00457 1516 Gene3D - 249 306 - -
Pumo9g00457 1516 PANTHER MYOSIN 787 1448 - -
Pumo9g00457 1516 ProSiteProfiles Dilute domain profile. 1139 1459 IPR002710 -
Pumo9g00457 1516 MobiDBLite consensus disorder prediction 1283 1304 - -
Pumo9g00457 1516 CDD MyosinXI_CBD 1090 1482 IPR037975 GO:0007015
Pumo9g00457 1516 ProSiteProfiles IQ motif profile. 760 784 IPR000048 GO:0005515
Pumo9g00457 1516 FunFam Myosin heavy chain 249 303 - -
Pumo9g00457 1516 SMART MYSc_2a 53 714 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo9g00457 1516 ProSiteProfiles IQ motif profile. 786 812 IPR000048 GO:0005515
Pumo9g00457 1516 ProSiteProfiles IQ motif profile. 831 860 IPR000048 GO:0005515
Pumo9g00457 1516 Pfam Myosin head (motor domain) 62 685 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo9g00457 1516 Coils Coil 952 1028 - -
Pumo9g00457 1516 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 39 757 IPR027417 -
Pumo9g00457 1516 Gene3D - 809 859 - -
Pumo9g00457 1516 Gene3D - 710 761 - -
Pumo9g00457 1516 Gene3D - 762 808 - -
Pumo9g00457 1516 PRINTS Myosin heavy chain signature 146 171 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo9g00457 1516 PRINTS Myosin heavy chain signature 478 506 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo9g00457 1516 PRINTS Myosin heavy chain signature 193 220 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo9g00457 1516 PRINTS Myosin heavy chain signature 425 453 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo9g00457 1516 PRINTS Myosin heavy chain signature 89 108 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo9g00457 1516 Pfam DIL domain 1335 1438 IPR002710 -
Pumo9g00457 1516 Pfam IQ calmodulin-binding motif 761 780 IPR000048 GO:0005515
Pumo9g00457 1516 Pfam IQ calmodulin-binding motif 787 803 IPR000048 GO:0005515
Pumo9g00457 1516 Pfam IQ calmodulin-binding motif 809 828 IPR000048 GO:0005515
Pumo9g00457 1516 Pfam IQ calmodulin-binding motif 736 755 IPR000048 GO:0005515
Pumo9g00457 1516 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 760 805 IPR027417 -
Pumo9g00457 1516 SMART DIL_2 1334 1441 IPR002710 -
Pumo9g00457 1516 ProSiteProfiles Myosin motor domain profile. 59 747 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo9g00457 1516 Gene3D - 435 620 - -
Pumo9g00457 1516 SMART iq_5 711 733 IPR000048 GO:0005515
Pumo9g00457 1516 SMART iq_5 782 804 IPR000048 GO:0005515
Pumo9g00457 1516 SMART iq_5 759 781 IPR000048 GO:0005515
Pumo9g00457 1516 SMART iq_5 734 756 IPR000048 GO:0005515
Pumo9g00457 1516 SMART iq_5 807 829 IPR000048 GO:0005515
Pumo9g00457 1516 SMART iq_5 830 852 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00457 Pumo-Chr9 7063493 7088349 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00457 1 1511 Myosins gene family AT4G33200 70.411 0.0 2199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00457 K10357 - gmx:100790815 2786.13