Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00447 ATGGGTGCATCTGCAAAATGGGTAAAAGCATTAATCGGACTTAACAACAAGAATGACATCGGTGGGAAGAAGAAGAAGTGGAGGCTGTGGAAGAGTTCTTCTGCAGGGGAAAACAGATCTCAAGACTACGATTATGCTAGCAGTGTGGCTTCGGATTCTTTCAATGCAGCAGTGGCCACTGTGGTCAGAGCTCCACCCAAGGATTTCAAACTCCTCAAGCAAGAATGGGCCGCTACCAGAATCCAAACCGCTTTCCGCGCCTTCTTGGCAAGAAGGGCATTGAGGGCGTTGAAGGGAGTGGTGAGGCTTCAAGCTCTTGTAAGGGGTAGACTAGTGAGGAAGCAGGCTGCGGTCACATTGAGGTGCATGCAGGCCTTGGTTCGTGTCCAGGCTCGTGTAAGAGCTCGGCGCGTGAGAATGTCCATTGAGGGGCAAGCAGTGCAGAACATGCTCAATGAGCGCCGCACCAAGGCTGAACTCTTCAAACAAGCTGAGGAAGGATGGTGTGATAGCAAAGGATCATTGCAAGATGTCAAGACAAAATTACAGATGAGGCAAGAAGGAGCTTTCAAGAGGGAGAGAGCAATTGCATACTCTCTTGCCCACAAGCAATGGAGATCAACTCCCATCTCTAATTCAAGAGCAAACGCCTCTCTCAACAATCATGAGATGGACAAGGCTAACTGCGGATGGAGTTGGTTGGAACGTTGGATGGCAGCTAAGCCATGGGAGAGTAGATTAATGGAACAAACCCATCATACTGATGCCACAGAGAAGACCCCTCCTCCACCAAAGAAATGTGTTGACTCCTCAAATTCAAAAACATCAGAACCATGCAATGTCAAAGTCAGAAAGAACAATGTCTCCACAAGGATTTCTGCTAGACCTCCCCATGTTGGGCAAGCTACTCGTTCGTCCTTGAGTCCAAGTTCTGAGTTTCACTATGATGAGAGCTCTAATTCACCCTCAATATGCACTTCTACAACACCAATATCTGGGAGTGCTGCATTGCCTTGTGACAGGACAGAGGATAGTAACAACACCAGGCCTAGTTACATGAGCCTGACCGAGTCAACCAAGGCAAAGCAGAAAACCAGCAATCATCAATACAATCGATCTCAGAGGCAGCAGTCCATGGATGAGTTCCAGTTTCTCAAAAGAACAGCAGTTTTCTCTAATGGGGATTCTAAAAGCACTGGTGCTTCTGACCCTTCAACCAACTTTTCTAGGCCACTTTACCTACCAACCTACATGGATAAGAGGCCACGGTGA 1272 0.478 MGASAKWVKALIGLNNKNDIGGKKKKWRLWKSSSAGENRSQDYDYASSVASDSFNAAVATVVRAPPKDFKLLKQEWAATRIQTAFRAFLARRALRALKGVVRLQALVRGRLVRKQAAVTLRCMQALVRVQARVRARRVRMSIEGQAVQNMLNERRTKAELFKQAEEGWCDSKGSLQDVKTKLQMRQEGAFKRERAIAYSLAHKQWRSTPISNSRANASLNNHEMDKANCGWSWLERWMAAKPWESRLMEQTHHTDATEKTPPPPKKCVDSSNSKTSEPCNVKVRKNNVSTRISARPPHVGQATRSSLSPSSEFHYDESSNSPSICTSTTPISGSAALPCDRTEDSNNTRPSYMSLTESTKAKQKTSNHQYNRSQRQQSMDEFQFLKRTAVFSNGDSKSTGASDPSTNFSRPLYLPTYMDKRPR 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00447 423 PANTHER IQ-DOMAIN 5-RELATED 1 391 - -
Pumo9g00447 423 SMART iq_5 96 117 IPR000048 GO:0005515
Pumo9g00447 423 SMART iq_5 73 95 IPR000048 GO:0005515
Pumo9g00447 423 ProSiteProfiles IQ motif profile. 98 125 IPR000048 GO:0005515
Pumo9g00447 423 ProSiteProfiles IQ motif profile. 74 102 IPR000048 GO:0005515
Pumo9g00447 423 MobiDBLite consensus disorder prediction 266 412 - -
Pumo9g00447 423 MobiDBLite consensus disorder prediction 249 423 - -
Pumo9g00447 423 Pfam IQ calmodulin-binding motif 76 95 IPR000048 GO:0005515
Pumo9g00447 423 Pfam IQ calmodulin-binding motif 98 115 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00447 Pumo-Chr9 6958033 6960817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00447 1 423 IQD Protein Family AT2G26180 58.503 2.91e-138 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00447 - - gmx:100787102 695.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00447 9 6958033 6960817 Pumo10g00250 10 3383196 3385269 PCT