Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00446 ATGGACTTGTCTGGTTCATTCTCCATCATACTTGGTCTACTTGCACCAATTCTTCAGGAGCCATTTAGGCAGATTCTGAAGAGAATACCAGGCACAATGGACAGGAAAATAGAGAGTACTAATGAGAAACTGAGTGGTCGTGTTGATGAGATTGTCAAGAGGAGAATGGAAGACAAGAACAGAACTTCAAAGAATTTCTTGTCACTCATTTTGAATGCAAGAGAATCAAAGACAGTATCAGAAAATGTCTTTTCACCTGACTACATTAGTGCTGTTACTTATGAGCACTTACTTGCTGGGTCAGCTACCACAGCCTTTACCTTGTCATCCATTGTCTACTTGGTTGCTGGGCACCAAGAAGTTGAGAAAAAGTTGCTTCAAGAGATTGATGGATTTGGTCCACCTGATAGGATTCCCACAGCTCAAGATCTTCATGACAGTTTTCCTTATCTTGATCAGGTGATTAAAGAGGCCATGAGGTTTTACACTGTCTCCCCATTGGTTGCAAGAGAAACATCAAATGAGGTAGAGATAGGAGGTTACCTTCTTCCAAAGGGGACGTGGGTATGGTTAGCTCTAGGAGTTCTAGCCAAAGATCCAAGGAATTTTCCAGAGCCTGAGAAGTTCAAACCAGAGAGGTTTGACCCCAAATGTGAAGAAATGAAACGAAGGCATCCTTATGCATTCATACCATTTGGAATTGGTCCCCGGGCATGTATTGGTCAGAAATTTTCCCTACAAGAGATCAAGCTTACTCTGATTCATTTGTACGGGAAATATGTTTTTCGTCATTCACTTGACATGGAAAAACCTGTAGAAATGGAATATGGTATGGTTCTCAACTTCAAGCATGGTGTCAAGCTTAGAGTCATAAGAAGAACATAA 885 0.4113 MDLSGSFSIILGLLAPILQEPFRQILKRIPGTMDRKIESTNEKLSGRVDEIVKRRMEDKNRTSKNFLSLILNARESKTVSENVFSPDYISAVTYEHLLAGSATTAFTLSSIVYLVAGHQEVEKKLLQEIDGFGPPDRIPTAQDLHDSFPYLDQVIKEAMRFYTVSPLVARETSNEVEIGGYLLPKGTWVWLALGVLAKDPRNFPEPEKFKPERFDPKCEEMKRRHPYAFIPFGIGPRACIGQKFSLQEIKLTLIHLYGKYVFRHSLDMEKPVEMEYGMVLNFKHGVKLRVIRRT 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00446 294 PRINTS P450 superfamily signature 99 116 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g00446 294 PRINTS P450 superfamily signature 239 250 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g00446 294 PRINTS P450 superfamily signature 153 164 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g00446 294 PRINTS P450 superfamily signature 230 239 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g00446 294 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 232 241 IPR017972 GO:0005506|GO:0016705
Pumo9g00446 294 Gene3D Cytochrome P450 3 294 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g00446 294 PRINTS E-class P450 group I signature 192 216 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g00446 294 PRINTS E-class P450 group I signature 239 262 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g00446 294 PRINTS E-class P450 group I signature 108 134 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g00446 294 PRINTS E-class P450 group I signature 152 170 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g00446 294 PRINTS E-class P450 group I signature 229 239 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g00446 294 PRINTS E-class P450 group I signature 88 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g00446 294 Pfam Cytochrome P450 21 279 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g00446 294 PANTHER THROMBOXANE-A SYNTHASE 1 293 - -
Pumo9g00446 294 SUPERFAMILY Cytochrome P450 22 293 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00446 Pumo-Chr9 6955863 6957545 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00446 19 293 Cytochrome P450 AT2G26170 74.909 2.40e-157 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00446 K20771 - gmx:100805689 569.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00446 9 6955863 6957545 Pumo10g00251 10 3385300 3395032 PCT