Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00424 ATGCCAAAGATGAAGCACCTTCTGAGAAAGCTTCACATCGGTGGTGGAGCTGCCACCATCAACCACAGTCCCAATCACAATCACGACGCATTGTCGTCGCACGCTCACAATCACACTCCCTCCACTTCCACGCTCCCTTCGCCCACCGTCGTTTCGGATCGGAGCCCCGTTGTTGAAGCCCAAAACGACGTCGTCAATTTCAATTTATTGCAGGAGGAGGAGTTTCAGATGCAACTCGCGCTCGCAATCAGTGCCTCCGATACCGATCGCCACGACACCGCCGAATCGGCGCAGATCGACGCCGCGAAACAGATGAGCCTCGGTTATTCTGCTTCCCTCACTGACACTCAAGCCCTAGTTCAGTTTCAATCCCTTCGTTATTGGAACTACAATGTGATTGGTTATGATGAGAAAGTGATGGATGGATTTTATGATGTTTATGGGGTTGCCTCCAATTTGGTTGAGCGGGGGAAGATGCCGTTGTTGGTGGATCTGCAGACGGCTCCTGTCTCGGGAGATGTTGATTGTGAGGTGATTTTGGTGAACCACGTGGTTGATCTTGAGCTCAATCAGCTTGAGAGGAAGGCGTGTAGTTTGGTCGAGGAGTGTTGTGTTTCTGAACTGGGACTGGTTTTGAGTGGCTTACTTCAGAAGCTTGCTGATGTTGTTGTTAATAGAATGGGTGGACCGGTTGTTAATGCCGAAAAACTTACAAAGAGGTGGGCTATGAGGAGTCGTGAGTTACGGGATTCTATGCAAACCATTGTCCTTCCCCTTGGCTGTCTTGATGTCGGACTTTCACGTCACCGAGCCCTACTTTTTAAGGTACTTGCTGATAGGATTAACATTCCCTGCATGCTGGTAAAAGGGAGCTATTATACAGGAACTGACGATGGGGCTGTGAATTTGATTAAAGCTGATGATGGAAGTGAATACATTATTGATATGATGGGTGCTCCTGGCACTCTTATTCCTGCTGAGGTACCCAGCAGCCAGCTCGAAAACAACAGTTTTGCTGTTAGGGGTTATGCAGAGATTGTAGGACTACCAGACAAGACACATTCAATGGTAGATGATGGAACTGGTGTGCTGGGAGTCTTTTCTGATTGTGGTGGAATTTCAACAATGGAGAGGATCCAGACAGAAGAATTATTAGTTATGGGCAGTCAAACAAAGACAGATGAAATAAATCATGTTAAAGTAAATGAGACAAGGAGATTTGAACATACAGAAGCATATGAATGCTCATCACGTACAGAACCATCACCTGCAGAGAATATGCGTGTAAAAAATGTCTCTAAGTATGTTCTCAGTGCAGCAAAGGACCCAGAATTTGCCCAAAAACTACATAATGTTCTAGTAGAGAGTGGTGCTTTACCTCCTCCTGATCTTTTTTCAGATATAAATCCCCAAGATAGGGGTGTAGATAAAGTAAATGAAAACATTGTTGATTCTGTTCAAGCTGACACAAATAGGTTGTTATTAAGCTATGAAAAGTCTCTCATACCCTCACATGGGGTGGGCTCTGCCAGCGATACTAAGTTATGTCAATCAGCTGACTGGTTAGCTGAACAGCAAAAAGAATTGCATACAGATATTGAATTTTACAATTTTTCACAGGGTGATAATACAAGGAATGGGTTTGTAAATGTTTCTGATAGAGATAATGACATAGAGCAATCTAATGCAATTAATGTTGATTTGGCTTCTGTCCATTCACATAAGATATGTAAAGAAAAGCGTCCTGAATATTCCTTGTCCAAGGCAGCTCTTTCCTGCAAAATGCATAATGGGGTTGACTGTTTCTGTGAAGATGATGAAAATGGTTCTAGAAACAATGTTGAAGCTTCTTTTAATAACAGTGAATTGGGGAAAGATTCAGCCGTTCAATTAAATGAGATGGGGGTCAATGGAGATTGTGATGATAGTAGAAACAAGGAAGTTAACCACGTTCTTGGTGAAGACTCAGAATGGGAAATTCAATGGGAGGATCTTGATATTGGTGAGCGTATTGGTATTGGTTCTTATGGTGAAGTTTATCGTGCTGATTGCAATGGCACTGAAGTTGCTGTAAAGAAGTTTCTGGACCAAGATTTCTCTGGTGATGCACTAGCTCAGTTCAAATCTGAAGTTGAGATCATGTTAAGGCTGCGGCATCCTAATGTCGTGCTCTTCATGGGAGCTATTACTCGCCCCCCACATTTCTCTATCTTGACAGAGTTTCTTCCAAGAGGCAGTTTATATAGGCTATTGCATCGTCCCAATCTTCGACTTGATGAGAAGAAACGGTTGCGCATGGCTCTAGATGTGGCTAAGGGAATGAATTACTTGCACACGAGCCATCCTCCTATTGTCCACCGAGATTTAAAGTCTCCAAATCTTCTTGTTGACAGGCATTGGATTGTTAAGGTCTGTGATTTTGGTCTGTCACGAATGAAGCACCATACATATTTGTCATCCAAATCCTGTGCTGGAACGCCTGAGTGGATGGCACCAGAAGTCTTGAGAAATGAGCCAGCCAATGAGAAGTGTGATGTGTATAGTTTTGGTGTGATCTTGTGGGAGTTGACTACCAAAAGAATTCCCTGGCAAGGTTTGAACCCAATGCAGGTTGTTGGAGCTGTTGGATTCCAAAATAAACGGCTTGAAATTCCAGAAGATGTCAATCCAGTAGTAGCACAGATAATTCGTGATTGCTGGCAAACGGAGCCACACTTGCGGCCATCATTCTCACAGCTGATGTCTCGTCTTTACCGTCTTCAACATTTGATTGTCCCAAAAACGGGCTCAACATAA 2796 0.4371 MPKMKHLLRKLHIGGGAATINHSPNHNHDALSSHAHNHTPSTSTLPSPTVVSDRSPVVEAQNDVVNFNLLQEEEFQMQLALAISASDTDRHDTAESAQIDAAKQMSLGYSASLTDTQALVQFQSLRYWNYNVIGYDEKVMDGFYDVYGVASNLVERGKMPLLVDLQTAPVSGDVDCEVILVNHVVDLELNQLERKACSLVEECCVSELGLVLSGLLQKLADVVVNRMGGPVVNAEKLTKRWAMRSRELRDSMQTIVLPLGCLDVGLSRHRALLFKVLADRINIPCMLVKGSYYTGTDDGAVNLIKADDGSEYIIDMMGAPGTLIPAEVPSSQLENNSFAVRGYAEIVGLPDKTHSMVDDGTGVLGVFSDCGGISTMERIQTEELLVMGSQTKTDEINHVKVNETRRFEHTEAYECSSRTEPSPAENMRVKNVSKYVLSAAKDPEFAQKLHNVLVESGALPPPDLFSDINPQDRGVDKVNENIVDSVQADTNRLLLSYEKSLIPSHGVGSASDTKLCQSADWLAEQQKELHTDIEFYNFSQGDNTRNGFVNVSDRDNDIEQSNAINVDLASVHSHKICKEKRPEYSLSKAALSCKMHNGVDCFCEDDENGSRNNVEASFNNSELGKDSAVQLNEMGVNGDCDDSRNKEVNHVLGEDSEWEIQWEDLDIGERIGIGSYGEVYRADCNGTEVAVKKFLDQDFSGDALAQFKSEVEIMLRLRHPNVVLFMGAITRPPHFSILTEFLPRGSLYRLLHRPNLRLDEKKRLRMALDVAKGMNYLHTSHPPIVHRDLKSPNLLVDRHWIVKVCDFGLSRMKHHTYLSSKSCAGTPEWMAPEVLRNEPANEKCDVYSFGVILWELTTKRIPWQGLNPMQVVGAVGFQNKRLEIPEDVNPVVAQIIRDCWQTEPHLRPSFSQLMSRLYRLQHLIVPKTGST 931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00424 931 FunFam Serine/threonine-protein kinase isoform 1 655 743 - -
Pumo9g00424 931 Pfam Protein tyrosine and serine/threonine kinase 666 917 IPR001245 GO:0004672|GO:0006468
Pumo9g00424 931 Gene3D Transferase(Phosphotransferase) domain 1 744 926 - -
Pumo9g00424 931 ProSitePatterns Serine/Threonine protein kinases active-site signature. 784 796 IPR008271 GO:0004672|GO:0006468
Pumo9g00424 931 ProSiteProfiles Protein kinase domain profile. 665 925 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g00424 931 Pfam Ethylene-responsive protein kinase Le-CTR1 121 324 - -
Pumo9g00424 931 MobiDBLite consensus disorder prediction 20 53 - -
Pumo9g00424 931 Gene3D Phosphorylase Kinase; domain 1 658 742 - -
Pumo9g00424 931 SMART serkin_6 665 924 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g00424 931 ProSitePatterns Protein kinases ATP-binding region signature. 671 693 IPR017441 GO:0005524
Pumo9g00424 931 SUPERFAMILY Protein kinase-like (PK-like) 656 923 IPR011009 -
Pumo9g00424 931 PRINTS Tyrosine kinase catalytic domain signature 844 866 IPR001245 GO:0004672|GO:0006468
Pumo9g00424 931 PRINTS Tyrosine kinase catalytic domain signature 778 796 IPR001245 GO:0004672|GO:0006468
Pumo9g00424 931 PRINTS Tyrosine kinase catalytic domain signature 739 752 IPR001245 GO:0004672|GO:0006468
Pumo9g00424 931 PRINTS Tyrosine kinase catalytic domain signature 825 835 IPR001245 GO:0004672|GO:0006468
Pumo9g00424 931 PRINTS Tyrosine kinase catalytic domain signature 888 910 IPR001245 GO:0004672|GO:0006468
Pumo9g00424 931 MobiDBLite consensus disorder prediction 16 53 - -
Pumo9g00424 931 FunFam Serine/threonine-protein kinase CTR1 744 927 - -
Pumo9g00424 931 CDD STKc_MAP3K-like 671 917 - -
Pumo9g00424 931 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 131 917 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00424 Pumo-Chr9 6674043 6685708 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00424 613 931 MAP Kinase Kinase Kinase AT5G11850 76.398 4.32e-175 529
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Pumo9g00424 PK_Tyr_Ser-Thr 3e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00424 K04424 - gmx:100779137 1701.41