Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00407 ATGAAACATCCCTTTTTTTCCTTATCTTTTCCTGTGCTTTTTCCCCAAAAGGGTAATGGGATGGAAGATGCAACATTTTGTCGGGTTTATGATGGGCATGGAGGGAATGGACACAAAGTGAGCAAAATAGTAAACAGTCGTTTATCTTCCCTCATACTGGACCAAAAGAAAGTTCTTGAAAAGATTGATGCCATAGAGAATGGTTACCACAACACCCCAAAAAACCATGTTGACACAGTTCAAGAGCACTCGGCTGCAAGGAACATTCAGAAATGGAAAGAAGCAATTGTTAGTGCTTTCAAGGTGACGGACAAGGAGGTGAAGCTTCAAAAGAATCTAGACCGCTCTAGCAGTGGAACCACTGCTGTAGTTATCATAAAACAGGGTGAAGGTCTTGTCATAGCTAATCTGGGTGACTCAAGAGCAGTGTTGGGAACAATCTGTGATGAAAAACTCAGGGCCATTCAATTGACCACAGATTTGAAGCCGGCATTACCTCGAGAAGCAGAAAGAATAAGGAGGTGCAATGGCTGTGTGTATGTGTTGAAGGAAGAACCAGATATCCAGCGAGTGTGGATGCCCAACAATGAGAACTCCCCTGGCCTAGCCATGTCTCGATCTTTTGGAGATTTTCTGCTCAAAGATCACGGTGTCATTGCCATCCCAGATATTTCGTATCATCCTCTAACATCAAGTGACCAATTTATTGTTCTTGCAAGTGATGGGGTGTGGGATGTACTAAGCAACAATGAGGTTGCATCAATTGTGTGGAGTGTAGACAGTGAAGAGGCAGCAGCAAGGGCAGTAGTGGAAGCAGCCACTGCTGCATGGAAAGACAAGTATCCTTCTTACATGGCAGATGAGTGCACCGTTGTTTGCCTCTTCCTGCACAAGAAATCACAACTTCGGCCATGA 915 0.4437 MKHPFFSLSFPVLFPQKGNGMEDATFCRVYDGHGGNGHKVSKIVNSRLSSLILDQKKVLEKIDAIENGYHNTPKNHVDTVQEHSAARNIQKWKEAIVSAFKVTDKEVKLQKNLDRSSSGTTAVVIIKQGEGLVIANLGDSRAVLGTICDEKLRAIQLTTDLKPALPREAERIRRCNGCVYVLKEEPDIQRVWMPNNENSPGLAMSRSFGDFLLKDHGVIAIPDISYHPLTSSDQFIVLASDGVWDVLSNNEVASIVWSVDSEEAAARAVVEAATAAWKDKYPSYMADECTVVCLFLHKKSQLRP 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00407 304 Gene3D - 10 300 IPR036457 -
Pumo9g00407 304 SUPERFAMILY PP2C-like 18 297 IPR036457 -
Pumo9g00407 304 SMART PP2C_4 4 294 IPR001932 -
Pumo9g00407 304 PANTHER PROTEIN PHOSPHATASE 21 294 IPR015655 GO:0004722|GO:0006470
Pumo9g00407 304 ProSiteProfiles PPM-type phosphatase domain profile. 7 296 IPR001932 -
Pumo9g00407 304 CDD PP2Cc 14 260 IPR001932 -
Pumo9g00407 304 Pfam Protein phosphatase 2C 20 274 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00407 Pumo-Chr9 6504250 6507884 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00407 17 301 PP2C-type Phosphatase Gene Family AT5G26010 51.220 6.80e-88 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00407 - - gmx:100815312 488.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00407 9 6504250 6507884 Pumo9g00407 9 6504250 6507884 ECH
Pumo9g00407 9 6504250 6507884 Pumo10g00273 10 3673884 3675557 PCT