Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00377 ATGAAGTCCATGAATGATAGCAACACCGATGATGGGAACAATCATAACTGGTTGGGGTTCTCTCTCTCACCCCACATGAAAATGGATGTTACTTCTTCTTCTGCTGGCCCTCCCCATCATCATCATCATCACTACTATCATCACCCTCAGGCTTCTGCTGCAGCAGCAGCAGCTTGCAACACTGTTCCCACTAACTTCTATATGTCACCCTCACACCTCAACACCTCAGGAATCTGTTATGGTGTTGGAGAAAACAGTGCCTTTCACCCTCCTTTAGCCATGATGCCTCTCAAGTCAGATGGGTCACTTTGCATTATGGAAGCTCTCACCAGATCACAAACCCAAGTGATGGTGCCAACTTCGTCTCCAAAACTTGAGGACTTCCTTGGTGGTGCAACTATGGGGTCCCAAGACTATGGAGGGCATGAAAGGGAAGCAATGGCTCTAAGCCTAGACAGCATCTACTATAGTAACCAGAATGCTGAACCTGAAACCAACAGAGACCATTCTTCTTCTTTGGACCTTCTTTCTGACCCTTTCAGGCAACAAACCCATCCATATTACTCGGGGCTTGGAATTTACCAAGTGGAGGAAGAGGCCAAGGAACCACCACCCCACATGGCAGTTTGCAGCTCCCAAATGCCTCAAGTGGTGGAAGAAGGCATTGCTTGCTTCAAAAACTGGGTGCCCCCAAGGGAATATTCTTCCACTCAGCAGAATCTGGAGCAGCATCAAGTGAATAGTAGTAGTAGTGGCCTTGGAGAGGATAATGGTGCTTCTGGGAATGTTGGTGTTGGTAGTGTTGGGTGTGGGGAGTTACAGTCTCTAAGCTTGTCTATGAGCCCTGGTTCTCAATCAAGCTGTGTCACAGTTCCAACTCAGATCTCATCTTCTGGGACTGACTCAGTGGCTGTGGATGCCAAGAAGAGAGGGTCTGCTAAGCTTGGCCAGAAGCAACCTGTGCATAGGAAATCCATTGACACATTCGGGCAGAGAACTTCTCAGTATAGAGGTGTGACAAGGCATAGATGGACTGGTAGATATGAAGCGCATTTGTGGGATAACAGTTGCAAGAAGGAAGGGCAAACCAGGAAAGGACGACAAGGTGGTTATGACATGGAAGAGAAAGCTGCAAGGGCTTATGATCTCGCGGCTCTCAAGTATTGGGGACCTTCAACGCACATAAACTTCCCGCTAGAAAATTACCAAACTGAACTTGAAGAAATGAAGAACATGAGTAGGCAGGAATACGTGGCCCACTTGAGAAGAAAGAGTAGTGGGTTTTCAAGGGGTGCCTCAATGTACAGAGGAGTGACAAGGCACCACCAACATGGCAGATGGCAAGCAAGGATAGGCAGAGTTGCAGGAAATAAGGACCTTTATCTTGGGACATTCAGCACTCAAGAAGAAGCAGCTGAAGCATATGATGTAGCTGCAATCAAATTTCGTGGGGTGAATGCTGTGACCAACTTTGACATATCAAGATACGATGTTGAGAGGATCATGGCCAGCAACACCCTTCTTGCGGGGGAGCTAGCTAGAAGAAACAAGGATAGTGAGCCAAGAACTGAGGCCATAGAGTACAATGTTGTGTCAAGCCAACAAGTCATAAGCAGCAGGGAAGAAGTTGAGGTTATGAACAAGAACAATAACAACGACAATAATGATGAAAATGGTTCATCAGATTGGAAGATGGGTTTGTATCATCATCAGCAACAGTCAAACAACTGCGACCAGAAAACCATGAAGTGTGGAAATTATAGAGGTGCTGCTTTCTCTGTGTCCCTACAAGATCTCATTGGGATTGACTCAGTAGGATCTAGCCAGGCCATGATAGATGAGTCTACTAAGATAGGGACTCATTTTTCAAACCCTTCCTCGCTGGTCACCAGTTTAAGCAGCTCAAGGGAAGGTAGCCCTGATAAAACGGGCCCCACTTTGCTTTTTCCAAAGCCTCCAATGGGGTCAAAGATTGTTACTAGCCCTATTGCTAATGGTGTCACTGTTGGCTCTTGGTTTCCCTCTCAAATGAGGCCAGTCTCCATGTCTCACTTGCCAGTTTTTGCAGCTTGGAGTGATACCTAG 2085 0.4676 MKSMNDSNTDDGNNHNWLGFSLSPHMKMDVTSSSAGPPHHHHHHYYHHPQASAAAAAACNTVPTNFYMSPSHLNTSGICYGVGENSAFHPPLAMMPLKSDGSLCIMEALTRSQTQVMVPTSSPKLEDFLGGATMGSQDYGGHEREAMALSLDSIYYSNQNAEPETNRDHSSSLDLLSDPFRQQTHPYYSGLGIYQVEEEAKEPPPHMAVCSSQMPQVVEEGIACFKNWVPPREYSSTQQNLEQHQVNSSSSGLGEDNGASGNVGVGSVGCGELQSLSLSMSPGSQSSCVTVPTQISSSGTDSVAVDAKKRGSAKLGQKQPVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQGGYDMEEKAARAYDLAALKYWGPSTHINFPLENYQTELEEMKNMSRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDVAAIKFRGVNAVTNFDISRYDVERIMASNTLLAGELARRNKDSEPRTEAIEYNVVSSQQVISSREEVEVMNKNNNNDNNDENGSSDWKMGLYHHQQQSNNCDQKTMKCGNYRGAAFSVSLQDLIGIDSVGSSQAMIDESTKIGTHFSNPSSLVTSLSSSREGSPDKTGPTLLFPKPPMGSKIVTSPIANGVTVGSWFPSQMRPVSMSHLPVFAAWSDT 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00377 694 ProSiteProfiles AP2/ERF domain profile. 434 492 IPR001471 GO:0003700|GO:0006355
Pumo9g00377 694 MobiDBLite consensus disorder prediction 623 641 - -
Pumo9g00377 694 MobiDBLite consensus disorder prediction 235 257 - -
Pumo9g00377 694 CDD AP2 433 494 IPR001471 GO:0003700|GO:0006355
Pumo9g00377 694 ProSiteProfiles AP2/ERF domain profile. 335 398 IPR001471 GO:0003700|GO:0006355
Pumo9g00377 694 FunFam AP2-like ethylene-responsive transcription factor ANT 334 400 - -
Pumo9g00377 694 CDD AP2 334 398 IPR001471 GO:0003700|GO:0006355
Pumo9g00377 694 MobiDBLite consensus disorder prediction 235 265 - -
Pumo9g00377 694 Pfam AP2 domain 335 390 IPR001471 GO:0003700|GO:0006355
Pumo9g00377 694 Pfam AP2 domain 435 484 IPR001471 GO:0003700|GO:0006355
Pumo9g00377 694 MobiDBLite consensus disorder prediction 623 652 - -
Pumo9g00377 694 SUPERFAMILY DNA-binding domain 334 400 IPR016177 GO:0003677
Pumo9g00377 694 Gene3D AP2/ERF domain 434 494 IPR036955 GO:0003700|GO:0006355
Pumo9g00377 694 Gene3D AP2/ERF domain 334 400 IPR036955 GO:0003700|GO:0006355
Pumo9g00377 694 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 118 569 - -
Pumo9g00377 694 FunFam AP2-like ethylene-responsive transcription factor 433 494 - -
Pumo9g00377 694 PRINTS Ethylene responsive element binding protein signature 336 347 IPR001471 GO:0003700|GO:0006355
Pumo9g00377 694 PRINTS Ethylene responsive element binding protein signature 474 494 IPR001471 GO:0003700|GO:0006355
Pumo9g00377 694 SMART rav1_2 335 404 IPR001471 GO:0003700|GO:0006355
Pumo9g00377 694 SMART rav1_2 434 498 IPR001471 GO:0003700|GO:0006355
Pumo9g00377 694 SUPERFAMILY DNA-binding domain 433 494 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00377 Pumo-Chr9 5983560 5987337 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00377 258 519 AP2-EREBP Transcription Factor Family AT4G37750 73.469 3.22e-140 420
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Pumo9g00377 AP2 4.9e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00377 K09285 - gmx:100798179 1166.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00377 9 5983560 5987337 Pumo9g00377 9 5983560 5987337 ECH
Pumo9g00377 9 5983560 5987337 Pumo10g00299 10 4067286 4070386 PCT