Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00324 ATGAAACCACTGATTTTCAAGCCGCTCCAAATCGTTCTCCTCTTGCTGATACTCTGTAGCAGCAACACTAAAGCAGAAAAGCAAACAAGCCAGCATGCCAAAAAGACCTACATAATCCATATGGACAAGTCCACCATGCCCTTAACCTTCACCGACCACCTCACCTGGTTCGACTCATCGCTCAAATCAGCATCACCCTCCGCGGAGATTCTCTACACCTACAAACACGTGGCCCACGGCTTCTCCACGAGGCTCACTCCTCAAGAAGCAGACACACTCTCCCAACAGCCCGGAATCCTCTCCGTCATCCCCGAACTCAAGTACAAACTTCACACGACAAGAACCCCCGAGTTCCTCGGACTCGACAAAACCACCACCCTCCTACCCGCCTCCGAGCAACAGAGCCAGGTCATCATCGGAGTCCTCGACACCGGCGTCTGGCCCGAGCTCAAAAGCCTCGACGACACGGGCCTCGGCCCAGTACCTTCCACCTGGAAAGGCGAGTGCGAAATTGGCAACAACATGAACTCATCACACTGTAACAAGAAACTCGTCGGAGCAAGGTTTTTCTCCAAAGGCTACGAAGCCGCGCTTGGACCTATTGACTTAACCACGGAGTCAAAGTCAGCGCGTGACGACGACGGGCACGGGAGTCACACTTTGACCACCGCGGCAGGTTCGGTTGTGCCCGAAGCTAGCCTCTTCGGTTTGGCATCCGGAACGGCGCGAGGAATGGCCACGCAAGCGCGCGTGGCGGCTTACAAAGTGTGCTGGCTGGGCGGGTGCTTCACCTCCGACATAGCCGCGGGAATCGACAAGGCCATAGAAGACGGCGTGAATGTTTTGTCCATGTCGATTGGGGGAAGCTCCATGGAGTATTACAGGGACATCATTGCGATTGGCTCCTTCACTGCCACGTCTCACGGGATCCTAGTGTCCACGTCAGCAGGGAACGGTGGGCCCAGTCAAGCGAGTTTGTCCAACGTGGCACCCTGGATAACCACTGTGGGAGCGGGAACCATAGACCGTGATTTCCCTGCTTACATAACTCTCGGAACAGGGAAGACGTACACCGGAGCGTCGCTTTATAATGGTAAAGCCTTGTCGGATTCGCCGCTTCCTCTTATTTACGCTGGGAAGGCGAGTAACTCTTCTGTTGGGTATCTTTGCTTGCAAGATTCTCTGATTCCTGAAAAGGTTTCGGGGAAGATTGTTATATGTGAGAGAGGTGGGAATCCGAGAGTGGAGAAGGGTTTGGTGGTTAAGCTTGCTGGGGGTGCTGGAATGATTTTGGCCAATAGTGAAGCCTACGGAGAAGAGTTAGTTGCTGATTCTCATCTTCTCCCTGCTGCATCTTTGGGACAAAAAGCAAGCGAAATTTTGAAGAATTACGTTTCCTCTTCTCCTAATCCAACGGCCAAGATTGCTTTCTTAGGGACTCATTTGCAGGTTCAACCTTCTCCGGTTGTAGCGGCTTTTAGCTCCAGAGGACCGAATGCTCTCACGCCCAAGATTCTCAAACCGGATTTAATAGCGCCAGGTGTCAACATTTTAGCCGGTTGGACCGGTGCGATTGGACCAACTGGTTTGACCGTTGACAACCGCCACGTCAGCTTCAACATCATTTCTGGAACATCCATGTCATGCCCCCATGTGAGTGGCTTAGCTGCGATTCTCAAAGGCGCGCACCCTCAATGGAGCCCTGCTGCCATTAGGTCCGCACTCATGACAACAGCGTACACGAGCTACAAAAACGGCGAAACGATTCAAGATGTCGCAACAGGACAACCTGCCGACGCCGTTTGA 1806 0.5305 MKPLIFKPLQIVLLLLILCSSNTKAEKQTSQHAKKTYIIHMDKSTMPLTFTDHLTWFDSSLKSASPSAEILYTYKHVAHGFSTRLTPQEADTLSQQPGILSVIPELKYKLHTTRTPEFLGLDKTTTLLPASEQQSQVIIGVLDTGVWPELKSLDDTGLGPVPSTWKGECEIGNNMNSSHCNKKLVGARFFSKGYEAALGPIDLTTESKSARDDDGHGSHTLTTAAGSVVPEASLFGLASGTARGMATQARVAAYKVCWLGGCFTSDIAAGIDKAIEDGVNVLSMSIGGSSMEYYRDIIAIGSFTATSHGILVSTSAGNGGPSQASLSNVAPWITTVGAGTIDRDFPAYITLGTGKTYTGASLYNGKALSDSPLPLIYAGKASNSSVGYLCLQDSLIPEKVSGKIVICERGGNPRVEKGLVVKLAGGAGMILANSEAYGEELVADSHLLPAASLGQKASEILKNYVSSSPNPTAKIAFLGTHLQVQPSPVVAAFSSRGPNALTPKILKPDLIAPGVNILAGWTGAIGPTGLTVDNRHVSFNIISGTSMSCPHVSGLAAILKGAHPQWSPAAIRSALMTTAYTSYKNGETIQDVATGQPADAV 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00324 601 FunFam Subtilisin-like protease SBT1.5 136 353 - -
Pumo9g00324 601 CDD PA_subtilisin_like 348 475 - -
Pumo9g00324 601 Pfam PA domain 387 459 IPR003137 -
Pumo9g00324 601 Gene3D Peptidase S8/S53 domain 137 595 IPR036852 GO:0004252|GO:0006508
Pumo9g00324 601 SUPERFAMILY PA domain 371 436 IPR046450 -
Pumo9g00324 601 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 37 593 IPR045051 -
Pumo9g00324 601 Pfam Peptidase inhibitor I9 36 111 IPR010259 -
Pumo9g00324 601 FunFam Subtilisin-like protease SBT1.9 25 111 - -
Pumo9g00324 601 CDD Peptidases_S8_3 108 580 IPR034197 -
Pumo9g00324 601 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 111 IPR037045 -
Pumo9g00324 601 SUPERFAMILY Subtilisin-like 110 596 IPR036852 GO:0004252|GO:0006508
Pumo9g00324 601 PRINTS Subtilisin serine protease family (S8) signature 543 559 IPR015500 -
Pumo9g00324 601 PRINTS Subtilisin serine protease family (S8) signature 212 225 IPR015500 -
Pumo9g00324 601 PRINTS Subtilisin serine protease family (S8) signature 134 153 IPR015500 -
Pumo9g00324 601 ProSitePatterns Serine proteases, subtilase family, serine active site. 544 554 IPR023828 -
Pumo9g00324 601 ProSiteProfiles Serine proteases, subtilase domain profile. 107 601 - -
Pumo9g00324 601 Pfam Subtilase family 135 583 IPR000209 GO:0006508|GO:0008236
Pumo9g00324 601 Gene3D - 342 483 - -
Pumo9g00324 601 FunFam subtilisin-like protease SBT1.5 342 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00324 Pumo-Chr9 5096020 5097825 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00324 9 598 Subtilisin-like Serine Gene Family AT5G67360 65.821 0.0 808
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00324 - - gmx:100793808 1111.29