Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00297 ATGGAAAGTGGAGCACCCTTCCTTGACTGTCTCTTGCAGCACACTTTCAGAAGCATTTGCTCATTTCCTCATTCTTCAACTTCTTCCAAGTGGGTGTATGCAGTCTTCTGGAGGATAGTACCCCGAAACTTTCCTCCACCCAGGTGGGAATTTGGAGGGACAGCTCTTGATCGCTCAAAGGGAAATAAAAGAAACTGGATCCTTGTATGGGAAGATGGTTTCTGCGATTTTAATGAATGTGAGCAACAAGGGAGGAGTGGATACTTGAACCACAAGTTTGGAGCTGATGTATTCTTCAAAATGTCTCATGAGGTTTATAGTTATGGAGAAGGACTAATGGGGAAAGTGGCCGCAGATAATAGTCACAAGTGGGTTTACAGTGACACTCAAAATGGGTGTGAACCTAGCTACATTGGTGCGTGGAATGCTTCAATCGATCATCAACCAAGGACGTGGGAGTTTCAGTTAAATTCAGGTATTCAGACTATTGCTATCATAGCTGTCAGAGAAGGCATAGTACAACTTGGCTCATTTAACAAGGTCTTGTTCTTTCTGTTCCTTCCAAATTAA 570 0.4298 MESGAPFLDCLLQHTFRSICSFPHSSTSSKWVYAVFWRIVPRNFPPPRWEFGGTALDRSKGNKRNWILVWEDGFCDFNECEQQGRSGYLNHKFGADVFFKMSHEVYSYGEGLMGKVAADNSHKWVYSDTQNGCEPSYIGAWNASIDHQPRTWEFQLNSGIQTIAIIAVREGIVQLGSFNKVLFFLFLPN 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00297 189 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 12 181 IPR025610 -
Pumo9g00297 189 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 2 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00297 Pumo-Chr9 4775851 4777152 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00297 28 181 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 30.968 1.75e-14 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00297 - - gmx:100807289 361.303