Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo9g00292 | ATGGCTGTGAGCGATGGCAATGCGATTGCGGTGCAGGAAGCAGCCTCTGCGGGGATTCACAGCGTAGAGAAACTCGTGAACATGATTCTGAATCAGCAGAAGGGTAACGACGGTGGTTCAGAATTGGAAGCTGTTGCTGACGTGGCCGTGAACCGCTTCAGAGAGGTTATTTCGCTCCTCGACAAACCAACAAGAACCGGTCACGCTCGTTTCAGAAGAGCCCCTACAACAGTGCCACCTGTCCCTGTTGTTCAGTTGCAGCAAACGGTGGTGGATGATTCCAAACACAAACTGCAACAACAACATAAGACAGAACAAAAACAAACTACCTCTGCTTTTAAGGTTTATTGCCCCCCTCCTCCCCTGCCTCAAAATCAAAATCACCAACAACAACCTTTTGTTTTTCCTCTGCTTAAGAATGAAGCAAATGGTTCTACTACCAACTCCTATGTTTCTACGTTAACTGGGGACACAGAAAATTTGCAACGGTCGTGTCGCTCTTCCGGGTTTCAAATTTCTCACGTGTCACTGCAGGGGGGTTCTTTTATGCGTAAACCACCGCTTTCTTCAAATTCTGCCAAGAGGAAGTGCAATTCAACGGGTTTTCCTCATGTCAAGTGTGGATCGTCCTCTACGCAGTGCCATTGCTCCAAGAAAAGGAAATTGAAGTTGAAGAGAGTGATTAGAGTGCCGGCTATTAGTTCCAAGACTGCTGATATCCCACCCGATGAATATTCGTGGAGAAAATATGGACAGAAACCCATCAAAGGCTCTCCACACCCAAGAGGTTATTACAAGTGCACCAGCGTAAGAGGCTGCCCAGCACGCAAACACGTGGAGCGTGCTGTGGACGATTCCAACATGCTCGTTATAACCTACGAAGGAGAACATAATCACTCGCAAACCGCTTCTGAAGTGGCAAATGTTGTCCTTGAATCATCTTAG | 945 | 0.473 | MAVSDGNAIAVQEAASAGIHSVEKLVNMILNQQKGNDGGSELEAVADVAVNRFREVISLLDKPTRTGHARFRRAPTTVPPVPVVQLQQTVVDDSKHKLQQQHKTEQKQTTSAFKVYCPPPPLPQNQNHQQQPFVFPLLKNEANGSTTNSYVSTLTGDTENLQRSCRSSGFQISHVSLQGGSFMRKPPLSSNSAKRKCNSTGFPHVKCGSSSTQCHCSKKRKLKLKRVIRVPAISSKTADIPPDEYSWRKYGQKPIKGSPHPRGYYKCTSVRGCPARKHVERAVDDSNMLVITYEGEHNHSQTASEVANVVLESS | 314 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo9g00292 | 314 | SMART | WRKY_cls | 241 | 301 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Pumo9g00292 | 314 | Pfam | Plant zinc cluster domain | 194 | 239 | IPR018872 | - | |
Pumo9g00292 | 314 | Pfam | WRKY DNA -binding domain | 243 | 299 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Pumo9g00292 | 314 | ProSiteProfiles | WRKY domain profile. | 236 | 302 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Pumo9g00292 | 314 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 11 | 305 | IPR044810 | GO:0003700 | |
Pumo9g00292 | 314 | FunFam | WRKY transcription factor 65 | 225 | 302 | - | - | |
Pumo9g00292 | 314 | Gene3D | WRKY domain | 227 | 302 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Pumo9g00292 | 314 | SUPERFAMILY | WRKY DNA-binding domain | 237 | 301 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo9g00292 | Pumo-Chr9 | 4699568 | 4702122 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo9g00292 | 10 | 262 | WRKY Transcription Factor Family | AT4G24240 | 45.645 | 1.24e-60 | 194 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Pumo9g00292 | WRKY | 3.9e-26 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo9g00292 | - | - | gmx:100786245 | 498.434 |