Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00275 ATGGCATCAAGGATTTCCTTAATTTCTAGCATTACTCCTGAAAAAACTCAATGGAGGTTGAAAGTTCGGGTAATAAATCTATGGACATTGCCTGAGTATAAGAATCCTAACGAGCAAAGCAGTATTGAAATGATACTGATTGATGAACAGAGTGGAAAAATTCATGCATGTATCAAAAAGAAATATATTCCACAGTTTCAGCAAGTACTCAAGGAAGGATCAACATATATAATAGAAAACGTATTGGTAGCCCAAAATGATCCAAAATTCCAAACTACAAAACATAAGTTCAAGCTAAATTTTCTTGGGACAACTATTTTTTCTTTGGCAAATGCTGAAGAAATTCCGAAATATCATTTTGATTTCATGCCTTTTAAAGACATTTTGTCTTCAGCGAATGAAGACTTATTATTAGGTTAG 420 0.3262 MASRISLISSITPEKTQWRLKVRVINLWTLPEYKNPNEQSSIEMILIDEQSGKIHACIKKKYIPQFQQVLKEGSTYIIENVLVAQNDPKFQTTKHKFKLNFLGTTIFSLANAEEIPKYHFDFMPFKDILSSANEDLLLG 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00275 139 SUPERFAMILY Nucleic acid-binding proteins 7 108 IPR012340 -
Pumo9g00275 139 CDD RPA1_DBD_A_like 19 107 - -
Pumo9g00275 139 Pfam Domain of unknown function DUF223 43 130 IPR003871 -
Pumo9g00275 139 Gene3D - 4 111 IPR012340 -
Pumo9g00275 139 FunFam Replication protein A subunit 4 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00275 Pumo-Chr9 4252973 4253490 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00275 1 138 Core DNA Replication Machinery Family AT5G08020 23.404 5.35e-09 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00275 - - mtr:112416537 139.428