Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo9g00220 | ATGAGCCTAATGTTGTCAATAAAATTGCTTTTGTGGTTCCTGTTTTTTTCTTGGTGCCACTTTGGCATCCAATGTGAGGCCAACCAACAAGGGGAGTACCTCTATAAGCTTATTCGATCAAAGAGGGCTCAGAAACACTCTTATGGAGAAGCTTCTTCAATGGCTACAAATGGTGGTGATGGACATTTTTCGAAGGTTTATGTTGTTAAGGAACAATCCGGGTTGATGGAAGGTGACAAAGTGAAGGGTTTGCCGGGACAACCACAAGGGGTGGATTTTGATCAATATGGTGGCTATGTAACGGTGGATGCCAAGGCAGGGAGAGCACTGTTCTACTACCTTGTGGAGTCACCTCACAATGCTTCCAACAAGCCCCTTGTTCTATGGCTAAATGGAGGGCCTGGCTGCTCTTCCTTTGGGTATGGAGCCATGCAAGAACTGGGACCTTTTAGAGTCAACAGTGATGGAAAAACACTTTACAGAAATGAGTATGCATGGAACAACGTGGCAAACGTTATTTTCCTAGAGTCTCCAGCAGGAGTTGGCTTTTCATATTCAAACACTTCTTCTGACTACACTAAAACTGGTGACAAGAGCACAGCCATGGACTCTTACACTTTTCTTCTAAACTGGCTCGAGAGATTTCCACAGTACAAAACTCGAGACTTGTTCATCACTGGAGAAAGCTATGCTGGACATTATGTCCCTCAGCTAGCTGACACTATTCTTACTTATAATAAGCTTACAAATCACACAATCATCAACCTGAAAGGGGTTGCGGTTGGGAATGGCTGGATAGATGATAATATGTGTACAAAGGGAATGTATGAATATTTCTGGACACATGCTCTGAACTCTGATGAAACCCATGAGGGAATTCAAAGGCATTGTGACTTTGAGAGTGGTAACTTAACAAGTGAATGCATCAAATATCAAAACAGAGGGGATACTGAGATTGGAACCATTGACATATATGACATATATGCTCCCCCTTGTGATCCAGCTGCAACAAAAGCTGGTGCCAGTCCTGCCACTAACTCTGACAGCAATTTCGACCCTTGTTCTGAAGATTATACCAATTCCTACTTAAATCTCGCTGAAGTACAAGAGGCTCTTCATGCAAAAGCCTCAAAATGGTCTCCTTGCAGAGGGGTGGGATGGACAGATAGCCCAGCAACAATTCTACCCACTATAAATCGGTTAATATCAAGTGGGATAAACACCTGGATATATAGTGGTGATACAGATGGGCGTGTTCCCATAACATCATCTAGGTATTCAATAAATCGCTTGAAACTTCCAGTGGAGACAACATGGCGTCCATGGTATTCTGGCAATGAGGTTGGAGGATACTTGGTTGGGTACAAAGGGCTCACGCTAATCACTGTAAGAGGAGCTGGGCACATGGTTCCAAGTTACCAACCACAGCGAGCGCTAACCATGATCTCATTTTTCCTTCGTGGAGAACTTCCTCCTGAATTAACCTCTTAG | 1491 | 0.4366 | MSLMLSIKLLLWFLFFSWCHFGIQCEANQQGEYLYKLIRSKRAQKHSYGEASSMATNGGDGHFSKVYVVKEQSGLMEGDKVKGLPGQPQGVDFDQYGGYVTVDAKAGRALFYYLVESPHNASNKPLVLWLNGGPGCSSFGYGAMQELGPFRVNSDGKTLYRNEYAWNNVANVIFLESPAGVGFSYSNTSSDYTKTGDKSTAMDSYTFLLNWLERFPQYKTRDLFITGESYAGHYVPQLADTILTYNKLTNHTIINLKGVAVGNGWIDDNMCTKGMYEYFWTHALNSDETHEGIQRHCDFESGNLTSECIKYQNRGDTEIGTIDIYDIYAPPCDPAATKAGASPATNSDSNFDPCSEDYTNSYLNLAEVQEALHAKASKWSPCRGVGWTDSPATILPTINRLISSGINTWIYSGDTDGRVPITSSRYSINRLKLPVETTWRPWYSGNEVGGYLVGYKGLTLITVRGAGHMVPSYQPQRALTMISFFLRGELPPELTS | 496 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo9g00220 | 496 | FunFam | Carboxypeptidase | 394 | 488 | - | - | |
Pumo9g00220 | 496 | ProSitePatterns | Serine carboxypeptidases, histidine active site. | 458 | 475 | IPR033124 | GO:0004185 | |
Pumo9g00220 | 496 | PANTHER | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE | 79 | 475 | IPR001563 | GO:0004185|GO:0006508 | |
Pumo9g00220 | 496 | Gene3D | alpha/beta hydrolase | 76 | 334 | IPR029058 | - | |
Pumo9g00220 | 496 | ProSitePatterns | Serine carboxypeptidases, serine active site. | 225 | 232 | IPR018202 | GO:0004185 | |
Pumo9g00220 | 496 | Gene3D | - | 394 | 488 | - | - | |
Pumo9g00220 | 496 | Gene3D | - | 354 | 385 | - | - | |
Pumo9g00220 | 496 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 162 | 174 | IPR001563 | GO:0004185|GO:0006508 | |
Pumo9g00220 | 496 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 458 | 471 | IPR001563 | GO:0004185|GO:0006508 | |
Pumo9g00220 | 496 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 175 | 185 | IPR001563 | GO:0004185|GO:0006508 | |
Pumo9g00220 | 496 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 211 | 236 | IPR001563 | GO:0004185|GO:0006508 | |
Pumo9g00220 | 496 | FunFam | Carboxypeptidase | 75 | 334 | - | - | |
Pumo9g00220 | 496 | SUPERFAMILY | alpha/beta-Hydrolases | 81 | 489 | IPR029058 | - | |
Pumo9g00220 | 496 | Pfam | Serine carboxypeptidase | 85 | 487 | IPR001563 | GO:0004185|GO:0006508 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo9g00220 | Pumo-Chr9 | 3316293 | 3321645 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo9g00220 | 362 | 489 | Calmodulin-binding Proteins | AT2G22960 | 29.323 | 3.99e-12 | 63.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo9g00220 | K16297 | - | gmx:100818983 | 965.681 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Pumo9g00220 | 9 | 3316293 | 3321645 | Pumo9g00220 | 9 | 3316293 | 3321645 | ECH |