Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00214 ATGCCTCTTTCTCGCAAACCGCTTTCTCCGTCGCCGTTGACCGGAGCCAAGCAAATCGACGGAGATAGAAGAGCCCGTGATTTTTCTCCGGCGCGGCGCTTGACCAGGCAGAGGAAGCTCCGGCACCTCAGCGACCAAGACATTGGCTTCTTCCACTCCGACGAGTTTTCTTTTTTTCCGGGTTCGCCGGAGTTTCGCTCCCACAGCGCTTCCGACCACCGGTCGTTCTCTGCTCTGCCGCAACCGCTGCCGCTTCCGGAAGCGCCGTTGACCCGTCGAGCCAAGTCAATCAGCTGCTCCGGTTCCGTACATCGTCGCCTTTCATCTTCGTTAGAACATCATGGCTTTGCAAGTTCCAGGAACACAGTGTATCAAGATGCAGTGACAGTGACACGTACAAAACCTACACTCAATTTGGATAATTCTTCCTTGGATTCTACTATTGCAAATGGAAAATGCAATCTGAGAGGGCATATTCCGGCAGCAAATTTCTTAACAGGCAATAGTTCATGGAAAAACCGCAGAGCAGTGTCTCATGATGATGACTCTGAAGGTAATCCCCACTTGAATTTGGGTGTTGCTGCCAAGCCCAAGAGTGCCCCAACAAGTGTACTCACTAGTCCTGATACTAGTCCATGTAGATTAAGCAATGTAGATTTATTTGATCCTACCACCAACTTCTCTCTGGAAGTTAATGACAAATCGAAAATGTTATCAGCTAAAACTGTTCATAGTCCAGACCATTCTCCTATTCATTGCCCTCTAAGCCTCACTCGTTACTTCAATCCTAAAATTGAGGAGGGATCTCAAAACCATAAAGTCTTGTCCAGGGTGTGCCCTGAAAATAACCTTCTTGATTCACATCCCTTACCCCTTCCTCCTAGAGTTTCATCACCAGCACAATTATCTATGGCAATGTTGAATCAATCAAGTAGCATGCATCATGCTACTGAAAATCTGCCTTCAGTGAAAGGTCAATGGCAGAAAGGAAAACTTATTGGACGTGGTACCTTTGGAAGTGTTTTTCATGCAACCAACCTAGAAACTGGAGCCTCGTGTGCCATGAAGGAGGTCAATTTAATTCCTGATGATCCTACATCTGCCGAGTGTATTAAACAACTGGAACAGGAAATCAAAATTCTCGGTCAACTACACCACCCCAACATTGTGCAGTATTATGGAAGTGAAATAGTTGGCAATCATTTGTACATATATATGGAGTATGTACACCCGGGATCAATCAGTAAATTTATGCGTGAACATTGTGGAGCTATGACAGAATCTGTGGTTCGCAATTTTACGAGGCATATTCTCTCTGGATTAGCTTACTTACATAGTAACAAAACCATCCATAGAGATATCAAAGGTGCAAACTTGCTGGTCAATGAATCAGGCATTGTCAAACTTGCAGATTTTGGGCTGGCGAAAATTCTGATGGGGAATTCATATGATCTTTCTTTAAAGGGTAGTCCTTACTGGATGGCTCCAGAGGTCGTAAAAGGTGCCATAAAGAACGAATTCAATCCTGATGTTGTCATGGCCATTGATATATGGAGCCTAGGGTGCACCATTATAGAAATGTTGACAGGCAAACCTCCTTGGAGTGAAGTTGAAGGGCCTTCAGCCATGTTCAAGGTATTGCAAGAGTCCCCATCAATACCTGAAACTTTATCTTCAGTGGGAAAGGATTTCCTCCAGCAATGTTTCCAAAGGGACCCTGCAGATCGACCATCTGCGGCAACTCTTCTTAAGCATGCCTTTGTGCAGAATTTGCATGATCAAGATGTTCTAGTTCATTCACAATCCTATCCAAGAGGAGACCTAGGACCAGGAAGATACTCCCGAACAAAGCAATGCTAA 1860 0.4489 MPLSRKPLSPSPLTGAKQIDGDRRARDFSPARRLTRQRKLRHLSDQDIGFFHSDEFSFFPGSPEFRSHSASDHRSFSALPQPLPLPEAPLTRRAKSISCSGSVHRRLSSSLEHHGFASSRNTVYQDAVTVTRTKPTLNLDNSSLDSTIANGKCNLRGHIPAANFLTGNSSWKNRRAVSHDDDSEGNPHLNLGVAAKPKSAPTSVLTSPDTSPCRLSNVDLFDPTTNFSLEVNDKSKMLSAKTVHSPDHSPIHCPLSLTRYFNPKIEEGSQNHKVLSRVCPENNLLDSHPLPLPPRVSSPAQLSMAMLNQSSSMHHATENLPSVKGQWQKGKLIGRGTFGSVFHATNLETGASCAMKEVNLIPDDPTSAECIKQLEQEIKILGQLHHPNIVQYYGSEIVGNHLYIYMEYVHPGSISKFMREHCGAMTESVVRNFTRHILSGLAYLHSNKTIHRDIKGANLLVNESGIVKLADFGLAKILMGNSYDLSLKGSPYWMAPEVVKGAIKNEFNPDVVMAIDIWSLGCTIIEMLTGKPPWSEVEGPSAMFKVLQESPSIPETLSSVGKDFLQQCFQRDPADRPSAATLLKHAFVQNLHDQDVLVHSQSYPRGDLGPGRYSRTKQC 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00214 619 SMART serkin_6 327 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g00214 619 ProSitePatterns Protein kinases ATP-binding region signature. 333 356 IPR017441 GO:0005524
Pumo9g00214 619 FunFam Mitogen-activated protein kinase kinase kinase 5 324 618 - -
Pumo9g00214 619 Pfam Protein kinase domain 328 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g00214 619 ProSiteProfiles Protein kinase domain profile. 327 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g00214 619 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 92 598 - -
Pumo9g00214 619 MobiDBLite consensus disorder prediction 1 31 - -
Pumo9g00214 619 SUPERFAMILY Protein kinase-like (PK-like) 313 603 IPR011009 -
Pumo9g00214 619 Gene3D Transferase(Phosphotransferase) domain 1 324 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00214 Pumo-Chr9 3227628 3234097 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00214 281 591 MAP Kinase Kinase Kinase AT1G63700 52.516 1.48e-99 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pumo9g00214 Pkinase 4e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00214 - - gmx:100819530 1060.44