Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00207 ATGTCTATGAGTTTGAAAGCACTTGCAGAGAATCACAGATGTCCTCTTTGTCGGAAACTCCTTTCAGAAAAAACTGACCCGTTCTCTGAGTCTTCTAAAGAGGTTGATTCTGAGTCTTCCAAGTTTTCAAAGGGTGATTCATCATCAAGAAGATTATCTCCCAAGGCAGAAGCGCTGATAGAGCTTCTAACAGAAAGCTCCAAAGAAAATCCAGCCGCAAAATGTGTAGTATTTTCACAGTTTCCTGAGATGTTATCATATCTGGAAGAGACTTTGAGAGAAGCAGGTTTTAGGACACTATCTCTTTACAGAGTAATGGATGACAAGACTCATGTTATCCAGCAATTTGAGGCGCTAGAGGAACCGTTTGTCCTTCTTGTCAGCATCTGGATTGCAAAGAAATTAGACCTTGGAGCTGCATCTACGGTCTACTTCATGGAAGCGTCCAAGAAAAAAGCTGAGAAACGGGCAGTCAAATGCATACACCAGAATGGACAAAGAAAGGTTGTGAAGGTTGTTCGACTCATCACTAAAAATAGCATTGAAGAAAAAATCCTGGCGTTGCATGAGAAGAAAATAACTTCGAGTGGACTTCCGAGCTGGAGCAAAGCAAGGTTGTGTGCGGATAAAATTCGAGTATATGAAACCGATTTCATTTTGGAAGTGTGA 669 0.4126 MSMSLKALAENHRCPLCRKLLSEKTDPFSESSKEVDSESSKFSKGDSSSRRLSPKAEALIELLTESSKENPAAKCVVFSQFPEMLSYLEETLREAGFRTLSLYRVMDDKTHVIQQFEALEEPFVLLVSIWIAKKLDLGAASTVYFMEASKKKAEKRAVKCIHQNGQRKVVKVVRLITKNSIEEKILALHEKKITSSGLPSWSKARLCADKIRVYETDFILEV 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00207 222 MobiDBLite consensus disorder prediction 25 51 - -
Pumo9g00207 222 PANTHER TRANSCRIPTION TERMINATION FACTOR 2-RELATED 13 192 - -
Pumo9g00207 222 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 51 194 IPR027417 -
Pumo9g00207 222 MobiDBLite consensus disorder prediction 25 52 - -
Pumo9g00207 222 CDD SF2_C_SNF 52 176 - -
Pumo9g00207 222 Gene3D - 28 205 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00207 Pumo-Chr9 3064790 3065990 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00207 14 192 RAD5 or RAD16-like Gene Family AT5G05130 41.081 2.23e-26 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00207 K15711 - nnu:104607850 123.635