Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00194 ATGTCAGTTCACTCCAGCGACTCCATCACGCTTCTCGCCGTTTACTCTGCTCACAAATCCGGGAGAAGGTTCTGGAATTTTTCGAGACTCGCCGGAGACTGTACGAACGGACAGGCGGGAAAGTTGCCGGAGCGAATTTCCGATATCTCCGAGTCTTGTGCTCAGATGGTGCTTCAGCTGCACAATCAAATTGAGGTTAGGGTGAAGATTAAGGTGGTCACGGGTACTCCCAGTGGTGCTGTGGCGGCTGAAGCTAGATGGAGCGGCTCCCATTGGGTCATACTGGACAAGAAACTAAAGCAAGAGGTCAAGCATTGCATGGATGAACTCAACTGTAGCATAGTGGTGATGAATGGCTCACAGGCAAAAATCCTCAGGCTTAACTTAGGGTGTTCCGATGAACTCCAAACTCCTTTTTTCTCTGCCACTTCTTCACCAGGTATAGAAATTGCAAAGCTAAAAGGCCGAAAATTGAAGCATTCTACCCCAGTGAGTAGCCCTGAAGAAGCAGGTACTTCTGTTACAAGAAACATAGGAGTAAATTCAGTGTCAAGTTCTGACTCGACGACTTCTCTTTTCCTAGTCTATGAACAAAATCCTCTGTACGAGGGTCAGGGCCCAGAGAGAAAAACACACAAATCAATCAACGAACCAAAAGACTTCAACGTCCAGCCACCATTATACTTTGATCTTGAAAGAGATCGCCCTCCCCCTTCATGGACACGCCCAACAACATCTGCGGCTAGTGATAACAAGACTGTATTTTGGATTCCTCAAAACCACATTGTAGAAGAGAAGTTTCAGAAAACTAAAATCAACAGTGTTATCCAAAGAACTAAATCTCCAACTTCGAAAACTTTACTTGAGAATTTTATACATTGTGATCAAGAAATGAGGACAAATGAACTTGGGTTTAACCAAGCTCAAAGTAGAAGTTATGCCCCCAACTCGGGCATCAGAGATAACTCCATTCCTTTAGGCAGAACTACCTCTATACCTCCTCCCTTATGCTCACAGTGTCAGAATAAAGCACCAGTATTTGGGAAGCCTCCAAAACGGTTTTCTTTCAAAGAGCTAGAGGAAGCTACTGATATGTTCTCGGATGAGAATTTTTTGGCTGAAGGTGGATTTGGTGTGGTCTACAAGGGAATACTCAAAGATGGACAGGTTGTTGCGGTGAAACAGTTAAAGTTTGGTGGCTCTCAAGCAGATCTTGATTTCTGCAGGGAAGTTCGGGTTTTGAGCTGTGCACAACACAGAAATGTTGTACTGTTGATAGGATTTTGTATAGAGAGCAATTTGAGGATATTAGTCTATGAGTATATATGCAACGGATCCTTGGACCTCTACTTATATGGAGATGAGAGTATAACTTTGGATTGGAACTCGCGCTTAAAGATAGCAATTGGAACTGCACGAGGCTTACGCTACCTTCATGAAGATTGTAGAGTTGGTTGTATAGTGCACAGAGACCTTCGACCCAAAAATATTCTCTTAACCCATGACTTTGAACCTCTGGTGGCTGATTTTGGGCTTGCTAGATGGCTCTCAGAATGGAATATAGATACTGAAGATCGCGTTATAGGAACTTCAGGGTATCTTGCACCGGAGTATCTTGACGCTGGAAACCTTACATATAAAGTAGATGTATATGCATTTGGAATTGTATTATTAGAGTTAATAACAGGTAGAAGAATTAGCGAGTTGGAACAGTTCAATGGACACTCGTATCTTTCTGAATGGTTTCACCCTCTACGCATGTTAGAGCCCAGTCATATCTTACAAAACGTTCGTTCTCTCAAACCATGCTTCGATTCTGAGGAGTCATTGGAATTTAATCTTCAATTGCAAGCCATGGCACGAGCTGCTTCGTTGTGTCTACGTGTGGATCCTGATGCCAGACCCCCAATGTCAAAGATCCTGAGAGTGCTGGAAGGGGGTGATCCAGTTCGTCCTATGGGTTTAGACATCAATTCAGTTGGTAACACAAGTGGCCATTTAAGTGGTTTGAAATCACACACTCCACCTAAAGGTACAATAAGTCATTCTCGTAGACTATCACATTGA 2067 0.4335 MSVHSSDSITLLAVYSAHKSGRRFWNFSRLAGDCTNGQAGKLPERISDISESCAQMVLQLHNQIEVRVKIKVVTGTPSGAVAAEARWSGSHWVILDKKLKQEVKHCMDELNCSIVVMNGSQAKILRLNLGCSDELQTPFFSATSSPGIEIAKLKGRKLKHSTPVSSPEEAGTSVTRNIGVNSVSSSDSTTSLFLVYEQNPLYEGQGPERKTHKSINEPKDFNVQPPLYFDLERDRPPPSWTRPTTSAASDNKTVFWIPQNHIVEEKFQKTKINSVIQRTKSPTSKTLLENFIHCDQEMRTNELGFNQAQSRSYAPNSGIRDNSIPLGRTTSIPPPLCSQCQNKAPVFGKPPKRFSFKELEEATDMFSDENFLAEGGFGVVYKGILKDGQVVAVKQLKFGGSQADLDFCREVRVLSCAQHRNVVLLIGFCIESNLRILVYEYICNGSLDLYLYGDESITLDWNSRLKIAIGTARGLRYLHEDCRVGCIVHRDLRPKNILLTHDFEPLVADFGLARWLSEWNIDTEDRVIGTSGYLAPEYLDAGNLTYKVDVYAFGIVLLELITGRRISELEQFNGHSYLSEWFHPLRMLEPSHILQNVRSLKPCFDSEESLEFNLQLQAMARAASLCLRVDPDARPPMSKILRVLEGGDPVRPMGLDINSVGNTSGHLSGLKSHTPPKGTISHSRRLSH 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00194 688 SUPERFAMILY Protein kinase-like (PK-like) 346 644 IPR011009 -
Pumo9g00194 688 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 442 653 - -
Pumo9g00194 688 ProSitePatterns Tyrosine protein kinases specific active-site signature. 487 499 IPR008266 GO:0004672|GO:0006468
Pumo9g00194 688 Pfam Protein kinase domain 369 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g00194 688 ProSiteProfiles Protein kinase domain profile. 366 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g00194 688 CDD STKc_IRAK 372 646 - -
Pumo9g00194 688 MobiDBLite consensus disorder prediction 306 325 - -
Pumo9g00194 688 Gene3D Transferase(Phosphotransferase) domain 1 442 649 - -
Pumo9g00194 688 SMART tyrkin_6 366 644 IPR020635 GO:0004713|GO:0006468
Pumo9g00194 688 PANTHER OS01G0750732 PROTEIN 107 647 - -
Pumo9g00194 688 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 338 441 - -
Pumo9g00194 688 MobiDBLite consensus disorder prediction 656 688 - -
Pumo9g00194 688 MobiDBLite consensus disorder prediction 657 688 - -
Pumo9g00194 688 Gene3D Phosphorylase Kinase; domain 1 335 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00194 Pumo-Chr9 2765678 2772364 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00194 341 640 Trihelix Transcription Factor Family AT1G68690 46.885 2.15e-77 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Pumo9g00194 Pkinase 2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00194 - - gmx:100813141 1265.75