Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00184 ATGGGGAGAGAGCAACCCCAGTCTCCTTGCCTAACTGATGTCGAGCCAGACAGAATCAGTTGCTTACCGGGTCACGTAATAGACCAGATTCTGTCACATTTGTCAATTAGGGAAGCAGTGAGAACAAGTGTTTTATCTAGCAAATGGAGGTACAAATGGGCCACACTACCGATTCTTGTGTTCGATAACCAATGCGTCTCCGTGTCTTCTCAGGACCATATGATTATCAAGAACAAGCTTTTGGGAATTATAGATCACGTACTGCTACTTCATTCTGGGCCAATCAACAAGTTCAAGCTCTCCCATCGTGATTTCATTGGTGTGACTGATATTGATCGTTGGACGCTTCATCTATGCAGAAAGTCTGTTAAAGAGTTTGTGTTGGAAATCTGGAAAGGGCAACGTTATAAGATACACTCGTGTTTATTTTCTTGTCAAAGTTTGACACATTTAGAACTGTTTAATTGTTGGCTTAAACCTCCATCAACATTTCAAGGCTTCAGGAACTTGAAGAGTCTTGATCTGCAACATGTTACCTTGGCTCAAGATGTTTTTGAAAACTTGATATCCAGCTGCCCTCTGCTTGAACGGTTGACATTGATGAACTTTGATGGTTTCACTCGTCTTAATATTGATGCACCGAACCTCCTGTTTTTTGACATCGGAGGTAAATTTGAGGATATTAGCTTTGATAACACTTTCCAATTAGCTGTGGTATCCATTGGTTTGTATTTGAACTTTGAAATCAATCAAAGTAGACTGCATGGAGGCTCTAGCAATTTGCTCAAATTTTTTGTTCATCTGCCACACGTGCAAAGGCTAGAGGTTCAAAGCTATTTTTTAAAGTATTTGGCAGTGGGGGTTGTGCCAATAAAGCTTCCAAGACCATGCATTGATCTAAGTTATCTTTCCATACGAATAAACTTCAATGATTTGAAGGAAATTTCAGCTGCTCTTTGCCTCTTAAGAAGCTCGCCTAATCTACAAGAACTAGAAATATTGGCTCGACCTGAGGAGCAGACTGTTCTGTTAACACACACCTATTGTTGGGAAGATGTCTATTTTACTTGTCCAGTAATGCAACTGCGATATGTGAAGATAGATGGCATCTCTGGTATCAAACCCGAGTTAGATTTTATCAACTTTCTACTTCTATACTCTCCTGTGCTAGAAAGGATGACTGTGAAGCCTGTTGCAAACGTTGGATCAGAACTCATGAAAGAACTGTTGCGGTTTAGGAGAGCCTCAGGACGAGCTGAAATTATTTACCTGGAACCTTAG 1281 0.4052 MGREQPQSPCLTDVEPDRISCLPGHVIDQILSHLSIREAVRTSVLSSKWRYKWATLPILVFDNQCVSVSSQDHMIIKNKLLGIIDHVLLLHSGPINKFKLSHRDFIGVTDIDRWTLHLCRKSVKEFVLEIWKGQRYKIHSCLFSCQSLTHLELFNCWLKPPSTFQGFRNLKSLDLQHVTLAQDVFENLISSCPLLERLTLMNFDGFTRLNIDAPNLLFFDIGGKFEDISFDNTFQLAVVSIGLYLNFEINQSRLHGGSSNLLKFFVHLPHVQRLEVQSYFLKYLAVGVVPIKLPRPCIDLSYLSIRINFNDLKEISAALCLLRSSPNLQELEILARPEEQTVLLTHTYCWEDVYFTCPVMQLRYVKIDGISGIKPELDFINFLLLYSPVLERMTVKPVANVGSELMKELLRFRRASGRAEIIYLEP 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00184 426 SUPERFAMILY RNI-like 120 333 - -
Pumo9g00184 426 Gene3D Ribonuclease Inhibitor 98 412 IPR032675 -
Pumo9g00184 426 ProSiteProfiles F-box domain profile. 16 50 IPR001810 GO:0005515
Pumo9g00184 426 Pfam Leucine Rich Repeat 169 193 IPR013101 -
Pumo9g00184 426 SUPERFAMILY F-box domain 16 61 IPR036047 GO:0005515
Pumo9g00184 426 PANTHER F-BOX PROTEIN-LIKE 17 399 - -
Pumo9g00184 426 SMART 9598neu4hmm 356 424 IPR006566 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00184 Pumo-Chr9 2526320 2529200 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00184 14 203 EF-hand Containing Proteins AT5G41840 26.087 4.24e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00184 - - gmx:100782183 833.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00184 9 2526320 2529200 Pumo9g00184 9 2526320 2529200 ECH