Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00142 ATGCTAAATAGAGATTTAGCTACTTCATTGCACAGAGTCACTGGTTCAGATGGTAAATTACAGTCCCTGGATTGGATCACGAGATTGAAAATTGCAATAGGAGCTGCTGAAGGCATAGCTCACCTACATGAGTGCAGCCCTCCCCTTGTCCACAGAGATATCCAAGCTAGCAGTATACTACTTGATGATAAATTTGAAGTGCGACTTGGAAGTTTGAGTGAGGTTACTGCCCAAGGAGATCTTCAGCAAGGAGTCATCTCAAGGGTTTTCAGCAAGCCACCATCTTCTAATCAAGCCGATTCTGGGAAATCATCGGTGACATGCGCGTATGATGTCTACTGTTTTGGGAAGATTTTACTCGAGCTCATTACCGGTAACATTGAAGTCAGCAAGTCAGATGATGCCACTACAAAGGAGTGGTTAGAGCAAACCTTGCCTTACATCACTATATACGATAAAGAACGGGTGACTAAGATTATTGATCCATCATTGATCGTGGATGAGGACCTATTGGAAGAGGTATGGGCTATGGCAATTGTGGCCAATGCATGCTTGAATCCCAAACCTTCCAAACGTCCTCCTATGAGGCATGTCCTGAAAGCATTGGAAAATCCATTGAAGATTGTGAGAGAAGAAAATACTAGCTCAGCAAAGTTGAGAACAAACTCTTCTAGGAAATCTTGGAGCACTGCATTCTTTGGTAGCTGGAGACACAGCTCATCAGACAGTGGTGCCACAAACAAAGAGGGTTCTGGTGACACTAAAAAATCAGGAAAAGTAGGTTCTCAAAGTAGTGGAAATGATCACTCTTCTTCCAATAAAAGATCGTCCAATGAAATTTTCCCTGAACCATTGGAAATACAAGATGTGGAGACAGGAGAGGCAAGATAA 891 0.4276 MLNRDLATSLHRVTGSDGKLQSLDWITRLKIAIGAAEGIAHLHECSPPLVHRDIQASSILLDDKFEVRLGSLSEVTAQGDLQQGVISRVFSKPPSSNQADSGKSSVTCAYDVYCFGKILLELITGNIEVSKSDDATTKEWLEQTLPYITIYDKERVTKIIDPSLIVDEDLLEEVWAMAIVANACLNPKPSKRPPMRHVLKALENPLKIVREENTSSAKLRTNSSRKSWSTAFFGSWRHSSSDSGATNKEGSGDTKKSGKVGSQSSGNDHSSSNKRSSNEIFPEPLEIQDVETGEAR 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00142 296 PANTHER OS01G0253100 PROTEIN 1 209 - -
Pumo9g00142 296 SUPERFAMILY Protein kinase-like (PK-like) 4 202 IPR011009 -
Pumo9g00142 296 Gene3D Transferase(Phosphotransferase) domain 1 1 228 - -
Pumo9g00142 296 ProSiteProfiles Protein kinase domain profile. 1 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g00142 296 MobiDBLite consensus disorder prediction 237 296 - -
Pumo9g00142 296 FunFam Putative LRR receptor-like serine/threonine-protein kinase 1 222 - -
Pumo9g00142 296 MobiDBLite consensus disorder prediction 237 279 - -
Pumo9g00142 296 Pfam Protein kinase domain 30 200 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00142 Pumo-Chr9 1979543 1981594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00142 1 93 Miscellaneous Gene Families AT2G16250 69.474 2.68e-33 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Pumo9g00142 Pkinase 4.4e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00142 - - gmx:100798381 543.502