Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00115 ATGTCAAAATCTATGGAACTCCCAGATTGTGTATATCCTAGGCCACCATTTACCATTATCCCCCCATGTGCTCCAACACCAAAGCATTCTCTCTACCTATCCAATCTTGACAGCCAAAAGTTCCTCAGATTCTCCATTAAGTATGTGTACCTGTTCAAGAAATCTGTGGGCTTGGATGTGTTGAAGTCTTCTCTGTCAAGAGTTTTGGTGGATTACTACCCCTTGGCTGGGAGGTTGATCAGGAGCAGCATTTGTGATGAGGATGATCACAAGCTTGAGGTGGATTGCAATGGAGAAGGTGCTGTGTTTGCTGAGGCTTTCATGGATGCCACTGCTGAAGAATTACTTGAACCTTCCAAGCTGCCAAACAATTCATGGAGGAAGCTCTTTTACAAGGTGGAAGCTCAGAGTTTCTTAGATGTTCCTCCTCTTGTAATCCAGGTGACGAGTCTCCGATGCGGAGGGATGATCCTGTGCACGGCGATCAACCACTGCCTATGCGACGGCATCGGCACGTCACAGTTTCTACACGCTTGGGCCCAGCTCAGCAGAGAGCCCAACGCCGAATTGACAATCATACCCTTCCACGGGCGACACGTGTTAAAGCCTCGAGACCCTCCCCAGGTGCACTTCACGCACCCGCAGTACACCAGAAGAAACCCCACCCCTCACGTGGACCTGCACAAGTGGATGATGATGCAGTCGCAGTCGCTGGTTGCCACGTCATTCACGTTGGGGCCCTCGGAAGTGCTTCGATTAAAGAAACAGTGCGTTCCGTCGCTGAAGTGCATCACCACCTTCGAAACCGTGGCGGCACACACGTGGCGCGCATGGGTTAAATCACTGAAGCTGTGCCCCACGCAAACCGTTAAGCTCCTATTTTCCCTTAACGTTAGAAAAAAGGTTAACCTCCCCGAGGGGTATTATGGGAATGGGTTCGTTCTCGCATGTGCGGAGAGCATGGTGAAGGATTTAGTAGCGGTTAATAACAACATTCGTCACGGTTTGAAAGTGGTGCAAGAAGCTAAGGCTAGTTTGGACGATGAGGGGTATATAAGGTCGATGGTGGATTTGTTGGAGGACAAAACGGTGCGTGTTGATCTCTCTACGAGTTTGGTTATATCTCAATGGTCGAGGCTAGGGTTGGAGGATGTGGATTTCGGAGAAGGGAAACCGTTGCATATGGGTCCTTTAACGAGCTCTGTTTATTGCTTGCTTTTACCGGTTGTTGGAGATGGTAACGCGGCGAGAGTGCTTGTGTCTGTGCCGGAGAGTGTGGTGGAAAGTTTTCGTTATCACATGATGGTGAAAGAGAGTTGGGAAAAAGATGAAAATGGTGATGCTAACACAAATGGGTATCATGATCAACAACATGGATTAATCTGA 1386 0.4892 MSKSMELPDCVYPRPPFTIIPPCAPTPKHSLYLSNLDSQKFLRFSIKYVYLFKKSVGLDVLKSSLSRVLVDYYPLAGRLIRSSICDEDDHKLEVDCNGEGAVFAEAFMDATAEELLEPSKLPNNSWRKLFYKVEAQSFLDVPPLVIQVTSLRCGGMILCTAINHCLCDGIGTSQFLHAWAQLSREPNAELTIIPFHGRHVLKPRDPPQVHFTHPQYTRRNPTPHVDLHKWMMMQSQSLVATSFTLGPSEVLRLKKQCVPSLKCITTFETVAAHTWRAWVKSLKLCPTQTVKLLFSLNVRKKVNLPEGYYGNGFVLACAESMVKDLVAVNNNIRHGLKVVQEAKASLDDEGYIRSMVDLLEDKTVRVDLSTSLVISQWSRLGLEDVDFGEGKPLHMGPLTSSVYCLLLPVVGDGNAARVLVSVPESVVESFRYHMMVKESWEKDENGDANTNGYHDQQHGLI 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00115 461 Pfam Transferase family 19 434 - -
Pumo9g00115 461 Gene3D - 226 434 IPR023213 -
Pumo9g00115 461 Gene3D - 17 218 IPR023213 -
Pumo9g00115 461 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 19 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00115 Pumo-Chr9 1718478 1721186 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00115 18 397 Monolignol Biosynthesis Gene Families AT5G48930 30.424 1.05e-47 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00115 - - gmx:100797134 786.949