Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00114 ATGGCCTCATCCAGTGGAACCTCGAGCACGAGCATGTCGACAAAATTGATTCTGACTCAGAGCTCTGGGTCTGAGGAGGATTTGCAGCTTCTGATGGACCAAAGAAAAAAGAAGAGAAAGCAATCCAACCGTGAATCAGCCAGAAGATCCCGGATGCGAAAGCAGAAGCACTTGGATGATCTCATTGCACAAGTGGACCACCTCAAAAAGCAGAAAAGTCTAACCCTCATGAAAGTGAACATCACCACACAACACTATCTCAAGGTTGAGGCTGAAAATTTCATCCTAAGGGCCCAGAAGAATGAACTCACCCAAAGCCTGCAATCACTCAATGATATCATCAATCTCATCAACACAACCACCACCACCGGGGTCTACCAAACCGATTGCTATCATCTCTCAAGTGCAGATCATAATAATAATCATAATCATAACAACAATTATTACAACAATAATAATTTCATGAATCCCATGCACATGGCCTATCTGAACCAACCAATTGTGGCCACTGCTGACAACAACATGTTTCTGTGGTGA 537 0.4339 MASSSGTSSTSMSTKLILTQSSGSEEDLQLLMDQRKKKRKQSNRESARRSRMRKQKHLDDLIAQVDHLKKQKSLTLMKVNITTQHYLKVEAENFILRAQKNELTQSLQSLNDIINLINTTTTTGVYQTDCYHLSSADHNNNHNHNNNYYNNNNFMNPMHMAYLNQPIVATADNNMFLW 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00114 178 CDD bZIP_plant_GBF1 36 86 IPR045314 GO:0003700|GO:0006355
Pumo9g00114 178 SMART brlzneu 31 95 IPR004827 GO:0003700|GO:0006355
Pumo9g00114 178 Gene3D - 33 90 - -
Pumo9g00114 178 Coils Coil 51 71 - -
Pumo9g00114 178 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 38 53 IPR004827 GO:0003700|GO:0006355
Pumo9g00114 178 PANTHER BZIP TRANSCRIPTION FACTOR 44 3 174 - -
Pumo9g00114 178 MobiDBLite consensus disorder prediction 1 28 - -
Pumo9g00114 178 SUPERFAMILY Leucine zipper domain 35 88 IPR046347 GO:0003700|GO:0006355
Pumo9g00114 178 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 33 73 IPR004827 GO:0003700|GO:0006355
Pumo9g00114 178 MobiDBLite consensus disorder prediction 1 57 - -
Pumo9g00114 178 FunFam BZIP transcription factor 33 85 - -
Pumo9g00114 178 Pfam bZIP transcription factor 35 72 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00114 Pumo-Chr9 1680547 1682022 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00114 31 176 bZIP Transcription Factor Family AT4G34590 48.026 2.68e-38 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pumo9g00114 bZIP_1 4.6e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00114 K25786 - gmx:100101889 229.95