Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00107 ATGGATGAACAAACTGCATGCAGTGCAATTCTCTTGTTAACTGCACTGGATCCATATCCGCTTCTTCTACGCTTGGAATCGTATTCATTTTTCTTTCTTGTAATAATACCAGAAGCACTGTCAAAACTAAACAATGCATCATCAGAAGCAGTGCAAGCACACAACATATTGATTGTTGAAACAGTCAAAGGCTTGGTTCCCACATTATGTGATTTGGTAAAGAGAGTGGGTGCCTATCCAGTCACCAAAATTAACAAGCTCTCCAACTCAGTTGCCACACTAGTCACCATGCCTTTCATCAAATTCATAACTCTTCTTGTGATGATAGCTTTCCTCTCAGTTAAACTCTCCCTGGCTCACCCTGGCTTCCATTTTGGCTGGGGTGGTCATCATCATGGGGGGATATCTTTTGGTCTTTCACCTGAATTCTATCAGTTTTCATGCCCTCAAGCTAATGACATTGTCATGTCAGTGTTGGAGAAGGCCATTGCAAAGGACATGAGAATGGCTGCTTCTCTACTTAGACTTCACTTTCACGACTGCTTTGTGCAGGGCTGCGATGCATCAATTTTGTTGGATGATAGCGCAAGAATAGTCAGTGAAAAAAATTCTGGACCTAACAAAAATTCTGTCCGAGGTTTCGAAGTGATTGATAAGATAAAGTCTAAGTTGGAAGAAGCATGTCCTCGGACTGTGTCTTGTGCAGACATTCTTGCCCTTGCTGCCAGGGGCTCCACTGTTCTTAGTGGAGGACCCAACTGGGAGCTCCCATTAGGGAGAAGAGACTCAAAAACAGCAAGCCTAAACGGGTCTAACAAAAGCATTCCCCCACCAAATGCCACCATTGAAAATCTCGTGACCTTTTTCAAGCGTCAAGGCCTTGATGAAGTGGACCTTGTTGCCCTCTCAGGTGCACATACCATTGGGGTGGCAAGATGTGCCACATTCAAGCAGAGACTATACAACCAAAACGGAAACAACCAACCGGATGAGAATCTAGAAAAATCCTTTTACTTTGATTTGAAGACAATGTGCCCAAAATCAGGTGGTGACAACTTCATTTCTCCCTTGGACTTTGGCTCCCCAAGAATGTTTGATAATACCTATTTCAAACTCATACTTAGGGGGAAAGGACTTCTTAATTCAGATGAAGTGCTTCTTATGGGAAATGTTAAGGAAACTCGTGAATTGGTCAAGAAATATGCACGAGATGAGAGCCTCTTCTTTGAGCAATTTGCCATGTCCATGATCAAGATGGGGAACCTCCGTCCTCTCACTGGATTTAATGGTGAAGTTAGGAAGAATTGTCGCCATGTTAATTAA 1323 0.4301 MDEQTACSAILLLTALDPYPLLLRLESYSFFFLVIIPEALSKLNNASSEAVQAHNILIVETVKGLVPTLCDLVKRVGAYPVTKINKLSNSVATLVTMPFIKFITLLVMIAFLSVKLSLAHPGFHFGWGGHHHGGISFGLSPEFYQFSCPQANDIVMSVLEKAIAKDMRMAASLLRLHFHDCFVQGCDASILLDDSARIVSEKNSGPNKNSVRGFEVIDKIKSKLEEACPRTVSCADILALAARGSTVLSGGPNWELPLGRRDSKTASLNGSNKSIPPPNATIENLVTFFKRQGLDEVDLVALSGAHTIGVARCATFKQRLYNQNGNNQPDENLEKSFYFDLKTMCPKSGGDNFISPLDFGSPRMFDNTYFKLILRGKGLLNSDEVLLMGNVKETRELVKKYARDESLFFEQFAMSMIKMGNLRPLTGFNGEVRKNCRHVN 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00107 440 CDD secretory_peroxidase 139 439 IPR033905 GO:0004601|GO:0042744
Pumo9g00107 440 PRINTS Plant peroxidase signature 231 241 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo9g00107 440 PRINTS Plant peroxidase signature 297 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo9g00107 440 PRINTS Plant peroxidase signature 356 371 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo9g00107 440 PRINTS Plant peroxidase signature 212 225 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo9g00107 440 PRINTS Plant peroxidase signature 414 427 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo9g00107 440 PRINTS Plant peroxidase signature 250 265 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo9g00107 440 PRINTS Plant peroxidase signature 148 167 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo9g00107 440 PRINTS Plant peroxidase signature 172 192 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo9g00107 440 PRINTS Plant peroxidase signature 372 389 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo9g00107 440 FunFam Peroxidase 142 283 - -
Pumo9g00107 440 Pfam Peroxidase 157 404 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo9g00107 440 ProSitePatterns Peroxidases active site signature. 170 181 IPR019794 GO:0004601
Pumo9g00107 440 SUPERFAMILY Heme-dependent peroxidases 138 440 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pumo9g00107 440 Gene3D Peroxidase, domain 2 276 420 - -
Pumo9g00107 440 PANTHER PEROXIDASE 72-RELATED 136 439 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo9g00107 440 FunFam Peroxidase 276 419 - -
Pumo9g00107 440 PRINTS Haem peroxidase superfamily signature 358 373 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo9g00107 440 PRINTS Haem peroxidase superfamily signature 170 184 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo9g00107 440 PRINTS Haem peroxidase superfamily signature 298 313 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo9g00107 440 PRINTS Haem peroxidase superfamily signature 250 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo9g00107 440 PRINTS Haem peroxidase superfamily signature 232 249 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo9g00107 440 ProSiteProfiles Plant heme peroxidase family profile. 138 440 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo9g00107 440 ProSitePatterns Peroxidases proximal heme-ligand signature. 298 308 IPR019793 -
Pumo9g00107 440 Gene3D - 143 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00107 Pumo-Chr9 1632298 1635387 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00107 97 440 Peroxidase AT1G44970 72.254 0.0 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00107 K00430 - gmx:100795020 628.632