Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00086 ATGGGTGTCCTTGTTCTTCTTTCTCTGCTATCTATAGTCATCTTCATTCTCTTCATAATCCACACACAAAAAACAAACACTCCAAGAGCACCACCTCTTCCACCTGGTCCTCCACGTCTTCCTATCATTGGCAACCTTCACCACCTCCATAACTCATCCCCACATCGCTGCCTATGGCAACTCGCCAAACTCTACGGTCCTCTCATGCCGTTTCGCATCGGCGCCGTACAAACCGTCGTCGTTTCGTCAGCGAAAGTCGCCAAAGAAATATTGAAAACCCACGACCTCAGCTTCGCATCTAGGCCCCCCTTCGTGGGCCCGAGAAAGCTCTCTTACAACGGCTTGGACCTGGGCTTCGCGCCGTACGGCCCATGCTGGAGAGAAATGAAGAAACTCTGCATCATTCACCTCTTCAGCGCGCAACGCGTTCAGTCCTTCCGTCCAATTCGCGAACAAGAGGTTGCGCAAATGCTTCGGAAACTGTCGCAACACGAAGCTTCGGGTACTGTCGTGAACTTGACCGAAACGCTGATGTCGTTCACGAACTCCTTGATATGCAGAATCGCGTTAGGGAAAAAGTACGGTTGTGAGTACTACGAAGAAGAAGTTGAACTTGAGGTGGGAAACCGGAGGAGCAGGTTGCAGGTTCTGCTCAACGAGGCGCAAGCGTTGCTGGCGGAGTTTTTCTTTTCGGACTATTTTCCGTTTATAGGGGGATGGGTTGATAGACTCACGGGAACTCTGTCGCGGCTTGATAAAACGTTCAAGGAGTTGGATGCTTTCTACGAACGAGTCATCTATGACCACATGGATTCGGCCAAGAGTGGTAAAAAAGATAATGACAAAGAAGTGCAAGATATTATTGATATCTTTCTGCAGCTACTTGATAATCGTTCGTTCTCGTTTCATCTCACTCTCGACCACATAAAAGCCGTGCTCATGAACATCTTTATAGCAGGAACAGATCCGAGTTCAGCGACAATAGTTTGGGCAATGGCTGCACTGTTGAAGAATCCCAATGTGATGAGCAAGGTTCAAGGAGAAGTGAGAAATTTATTTGGGGACAAAGATTTTATAAACGAAGACGATGTTGAAAGGTTTCCTTATCTTAAGGCGGTGGTGAAGGAGACATTGAGACTGTTCCCACCTTCCCCACTACTCTTGCCAAGGGAAACGATGGAAACGTGCAACATAGAAGGGTACGAAATTCAACCGAAAACTATAGTGTATGTTAATTCATGGGCCATAGCAAGGGACCCTGAGAATTGGGAAAATCCCGAGGAATTTCGTCCCGAAAGGTTCCTTGGGAGTTCGATGGAGTTAAAGGGGAAGGAGTTTGAGGTAATCCCGTTTGGATCTGGACGGAGAATGTGTCCCGCGAAGCACATGGGAATCGTGAACGTTGAGCTTTCACTTGCGAATCTCGTCCACAGATTTGATTGGGAAGTGGCTACAGGGTTTGACGAGGAAGAAATGTTGGACACGCAAGTGAAACCAGGAATAACGATGCACAAGAAAAGTGATCTTTACCTAGTGGCAAAGAAACCAACAACGTAG 1557 0.4753 MGVLVLLSLLSIVIFILFIIHTQKTNTPRAPPLPPGPPRLPIIGNLHHLHNSSPHRCLWQLAKLYGPLMPFRIGAVQTVVVSSAKVAKEILKTHDLSFASRPPFVGPRKLSYNGLDLGFAPYGPCWREMKKLCIIHLFSAQRVQSFRPIREQEVAQMLRKLSQHEASGTVVNLTETLMSFTNSLICRIALGKKYGCEYYEEEVELEVGNRRSRLQVLLNEAQALLAEFFFSDYFPFIGGWVDRLTGTLSRLDKTFKELDAFYERVIYDHMDSAKSGKKDNDKEVQDIIDIFLQLLDNRSFSFHLTLDHIKAVLMNIFIAGTDPSSATIVWAMAALLKNPNVMSKVQGEVRNLFGDKDFINEDDVERFPYLKAVVKETLRLFPPSPLLLPRETMETCNIEGYEIQPKTIVYVNSWAIARDPENWENPEEFRPERFLGSSMELKGKEFEVIPFGSGRRMCPAKHMGIVNVELSLANLVHRFDWEVATGFDEEEMLDTQVKPGITMHKKSDLYLVAKKPTT 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00086 518 CDD CYP71-like 65 509 - -
Pumo9g00086 518 PANTHER CYTOCHROME P450 71B11-RELATED 15 514 - -
Pumo9g00086 518 SUPERFAMILY Cytochrome P450 34 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g00086 518 Gene3D Cytochrome P450 28 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g00086 518 Pfam Cytochrome P450 34 509 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g00086 518 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g00086 518 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g00086 518 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g00086 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
Pumo9g00086 518 FunFam Cytochrome P450 83B1 20 512 - -
Pumo9g00086 518 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g00086 518 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g00086 518 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g00086 518 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g00086 518 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g00086 518 PRINTS E-class P450 group I signature 412 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g00086 518 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g00086 518 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo9g00086 518 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00086 Pumo-Chr9 1330806 1333106 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00086 3 515 Cytochrome P450 AT4G31500 42.829 1.26e-154 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00086 - - gmx:606704 829.32