LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo9g00048	ATGGGTTTGAGAAAAATTCGAACTTGGACTGATTTTGGGACTTTGATTTGTGGTGTTGTTGAGCGGAGAATGAGAGTCGTGGTGGTGGTTGTTGTGGGAGCAGGTGGGTGGCGAGGGAGATGCGGAGGTGGAAGGCACTGTCGTGGGCAAATGCAAAACTGCAAAGAAGATGTCACGTTTCATAACATTGGCAATTTTGCAAAAGGGCCGCCTATTGCAGATGACAGCAGATCACTGCGTGTGCGAAAGGTTGTGAAACTTCCACCAAATGTTTCAGTTCCAGCAGTGTTGGTATTTGGAGATTCGATCATGGACACAGGCAACAACAACAACAACTTGGGAACAACGGCTCGGTGCAATTTCCCACCATATGGTAAAGATTTTAAAGGAGGGAAACCAACTGGCCGATTTAGTAACGGAAAGGTTCCATCGGATTTTATAGCTGAAGAATTGGGCATTAAAGAGTATCTACCGGCATACTTGGATCCACATCTCCAACCTGGTGAATTGGCCACTGGTGTGTGCTTTGCATCTGGTGGCGCAGGATACGATCCTTTGACATCGCTATCAGCGTCGGCTATATCTTTATCGGGTCAATTAGACTTGTTCAAAGAATACATAGGCAAGTTACGAGGAGTGGTTGGAGAAGAGAGAACAAACTTCATCTTAGCCAACAGTCTTTATGTTGTGGTATTTGGCAGCAATGACATTTCCAATACATACTTTTTGTCCCGTGTTAGACAACTGCAATATGATTTTCCTGCATACGCTGATTTTTTGCTCGCCTCAGCTTCTAATTTCTTCAAGATCACCTTTCTCTACCGCAACCTTTTCACTCAATCCATCTTCATCATCAGTAACTTCATCCTCCTCGCCGCCGCCACCACCCACAACCTCTCACCTGGGAAGGCGAGGCCAGAAACTCCGACGGAAAGGTCTTACACAAGGTCGAAAGCATCGTCAAGGTTCCTTACATTTTCGCGGCACCTCGAGGTTGGATTTACTGTCAAAGTTTTACTTGGCTCAGGAACTATAAACGTTCTTGTCGAAAATGGGTACCACCCCCCAAAACATTTTGACCATTCGCTCTTATCAATCTTTACTCTAAGCGCTTCCTTGTTTGGTTCTGGAAGGGATAGGGAGAACGCTGAAAGGGAGGGAACTGTGCCAGGTTTTGGAGGATCATATTCCATTGCTCAAGTTGAGGACATCATTAGAAAATGTCAAAGTATGCAAAAGCTGGTTATTGTGGCAACAAATATTCTTGAAAGCATGATTAATCATCCCACACCAACAAGGGCAGAAGTCTTGGACATTGCAATTGCAGTAAGACAAGGTGTTGATGCTATCATGCTTTCAGGAGAAACTGTACATGGAAAAAAGTACAGAAGGCTCTTCTGCAATGTCCACACAAAGTCAGACAGAAGTTCTGTCACAGTGGCTGATTATGGTTAA	1455	0.4467	MGLRKIRTWTDFGTLICGVVERRMRVVVVVVVGAGGWRGRCGGGRHCRGQMQNCKEDVTFHNIGNFAKGPPIADDSRSLRVRKVVKLPPNVSVPAVLVFGDSIMDTGNNNNNLGTTARCNFPPYGKDFKGGKPTGRFSNGKVPSDFIAEELGIKEYLPAYLDPHLQPGELATGVCFASGGAGYDPLTSLSASAISLSGQLDLFKEYIGKLRGVVGEERTNFILANSLYVVVFGSNDISNTYFLSRVRQLQYDFPAYADFLLASASNFFKITFLYRNLFTQSIFIISNFILLAAATTHNLSPGKARPETPTERSYTRSKASSRFLTFSRHLEVGFTVKVLLGSGTINVLVENGYHPPKHFDHSLLSIFTLSASLFGSGRDRENAEREGTVPGFGGSYSIAQVEDIIRKCQSMQKLVIVATNILESMINHPTPTRAEVLDIAIAVRQGVDAIMLSGETVHGKKYRRLFCNVHTKSDRSSVTVADYG	484

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo9g00048	484	Gene3D	SGNH hydrolase	86	282	IPR036514	-
	Pumo9g00048	484	PANTHER	GDSL ESTERASE/LIPASE EXL3	59	274	-	-
	Pumo9g00048	484	ProSitePatterns	Lipolytic enzymes "G-D-S-L" family, serine active site.	96	107	IPR008265	GO:0006629\|GO:0016298
	Pumo9g00048	484	PRINTS	Pyruvate kinase family signature	435	453	IPR001697	GO:0000287\|GO:0004743\|GO:0006096\|GO:0030955
	Pumo9g00048	484	PRINTS	Pyruvate kinase family signature	410	434	IPR001697	GO:0000287\|GO:0004743\|GO:0006096\|GO:0030955
	Pumo9g00048	484	Gene3D	-	396	467	IPR040442	-
	Pumo9g00048	484	SUPERFAMILY	Phosphoenolpyruvate/pyruvate domain	399	460	IPR015813	GO:0003824
	Pumo9g00048	484	Pfam	GDSL-like Lipase/Acylhydrolase	96	253	IPR001087	GO:0016788
	Pumo9g00048	484	Pfam	Pyruvate kinase, barrel domain	403	460	IPR015793	GO:0000287\|GO:0004743\|GO:0006096\|GO:0030955

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pumo9g00048	Pumo-Chr9	705974	727515	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pumo9g00048	90	242	Pollen Coat Proteome	AT1G75910	50.327	6.74e-38	140

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo9g00048	-		-	gmx:100776769	357.066