Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00047 ATGAAGCTCCCTTCCTCTTGTTTTCTGGCTTCAACAGTACTAGTCCGTTTGACAGTAGTATTATTAGTTGTTTCCTGCAGCAAAACAAAGGGTGCTGTGAAACTTCCAGCAAATGTTTCGGTTCCAGCAGTGTTGGTATTTGGAGATTCGATCATGGATACTGGCAACAACAACAACAACTTGATAACATCAGCTCGGTGCAACTTCCCACCATATGGCAAAGATTTTAAGGGAGGGATCCCTACTGGCCGATTTTCCAATGGAAAGGTTCCATCAGACCTTCTAGCTGGAGAATTAGGCATAAAAGAGTATCTACCAGCATACTTGGATCCAAATCTCCAGCTTAGTGAATTAGCCACCGGTGTGTGCTTTGCATCCGGCGGTGCCGGATACGATCCTTTGACATCACAAACTGTGACAGCTATATCACTATCCGGTCAACTAGACCTGTTCAAAGAATACATAGTGAAGCTAAAAGGACACGTTGGAGAGAACACAACAAACTTCATCCTAGCCAACAGTCTTATCTTTGTCGTTTTAGGCAGCAATGACATTTCCAACACATACTTTTTGTCCCATGTTAGAGAACTCCAATATGATGTTCCTGCTTACTCTGACCTCATGGTTAACTCAGCTTCTAATTTCTTCAAGGAAATATATCAACTAGGTGCGCGGAGGATTGCAGTATTCAGTGCGCCGCCAGTTGGGTGTGTGCCGTTTCACAGAACATTGAGTGGTGGAATAGCAAGAAAATGTATACAAAAGTACAACGATGCAGTGGTGTTATTTAACGACAAACTGTCCAAGGAGATAAATTCCCTTAATCAGAACCTTCCAAACAGCAGGATTGTTTACTTCGACGTTTACAACCCTTTGCTTGATATCGTTGTAAACCACCAAAAATATGGTTACAAAGTCGGGGACAGAGGGTGTTGTGGCACAGGCAATCTAGAGGTTGCATTGACATGCAACCATTTGGATGCCACGTGTCCCAACGTTTTGGATTATGTGTTTTGGGATGGTTTTCACCCTAGTGAAAGCGTTTACAAAAAGCTTGTGCCCGCTATTCTACAGAAATATATACACCAGTTTGTGTGA 1098 0.4281 MKLPSSCFLASTVLVRLTVVLLVVSCSKTKGAVKLPANVSVPAVLVFGDSIMDTGNNNNNLITSARCNFPPYGKDFKGGIPTGRFSNGKVPSDLLAGELGIKEYLPAYLDPNLQLSELATGVCFASGGAGYDPLTSQTVTAISLSGQLDLFKEYIVKLKGHVGENTTNFILANSLIFVVLGSNDISNTYFLSHVRELQYDVPAYSDLMVNSASNFFKEIYQLGARRIAVFSAPPVGCVPFHRTLSGGIARKCIQKYNDAVVLFNDKLSKEINSLNQNLPNSRIVYFDVYNPLLDIVVNHQKYGYKVGDRGCCGTGNLEVALTCNHLDATCPNVLDYVFWDGFHPSESVYKKLVPAILQKYIHQFV 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00047 365 Gene3D SGNH hydrolase 31 361 IPR036514 -
Pumo9g00047 365 SUPERFAMILY SGNH hydrolase 37 358 - -
Pumo9g00047 365 PANTHER GDSL ESTERASE/LIPASE EXL3 21 353 - -
Pumo9g00047 365 FunFam GDSL esterase/lipase APG 33 361 - -
Pumo9g00047 365 Pfam GDSL-like Lipase/Acylhydrolase 44 352 IPR001087 GO:0016788
Pumo9g00047 365 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 44 55 IPR008265 GO:0006629|GO:0016298
Pumo9g00047 365 CDD SGNH_plant_lipase_like 42 360 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00047 Pumo-Chr9 699176 704182 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00047 38 358 Pollen Coat Proteome AT1G75910 39.506 1.05e-69 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00047 - - gmx:100786548 647.891