Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00044 ATGGCTCAGACCACACCGAATCACACAGTGAGCGTATCTGGGTGGGCAGCTCATGATTCTTCGGGCAAGATAACCCCCTACACCTTCAAAAGAAGGGAGAACGGTGTTAACGATGTGACGATAAAGATATTGTATTGTGGGATCTGCCACACGGACCTCCACTATGCTAAAAATGAATGGGGAATCACTATGTATCCTGTAGTACCCGGACACGAGATCATTGGGGTGGTAACTAAGGTGGGGAGGGATGTGAAGGGGTTCAAGGAAGGAGACAGAGTGGGTGTGGGGTGTTTGGCCGCTTCATGTTTGGAATGTGAGCACTGCAAGACCGATCAGGAAAACTACTGCGAAAAATTGCAATTTGTTTACAACGGAATCTTCTGGGATGGCAGCATCACCTATGGTGGCTACTCCCAATTCTTTGTCGCAGATTACAGATATGTGGTACACATTCCGGCAAACCTACCCATGGACGCAGCGGCTCCTCTGCTATGCGCAGGAATAACAGTGTTCAGTCCTTTGAAAGACCACGATTTGGTAGAATCGCCGGGGAAAAGGATCGGGGTGGTTGGTCTGGGAGGCCTTGGACACATAGCTGTTAAATTTGGCAAGGCATTTGGCCACCATGTTACCGTCATCAGCACTTCTCCCTCCAAAGAGGCCGAAGCTAAGGACCGTTTGGGTGCTGATGATTTCATAGTCAGCTCCAACCCTAAACAATTACAGGCTGCAAGGAGAAGCATAGATTTCATATTGGACACTGTTTCGGCAGAGCACTCCCTGTTGCCCATCTTGGAATTGCTCAAAGTCAACGGGACCTTATTTCTCGTGGGTGCACCGGACAAGCCTTTACAGTTGCCGGCTTTCCCATTGATATTTGGCAAGAGATCAGTGAAAGGTGGGATCATAGGGGGAATAAAAGAGACGCAGGAAATGTTGAACGTTTGTGCCAAGTACAACATCACGAGTGACATTGAATTAATCACACCAGACAGAATCAACGAGGCTATGGAGCGCCTTGCTAAGAATGATGTGCGCTACCGTTTCGTCATTGACATTGCCGCCAATTCCAACAACTAG 1080 0.4843 MAQTTPNHTVSVSGWAAHDSSGKITPYTFKRRENGVNDVTIKILYCGICHTDLHYAKNEWGITMYPVVPGHEIIGVVTKVGRDVKGFKEGDRVGVGCLAASCLECEHCKTDQENYCEKLQFVYNGIFWDGSITYGGYSQFFVADYRYVVHIPANLPMDAAAPLLCAGITVFSPLKDHDLVESPGKRIGVVGLGGLGHIAVKFGKAFGHHVTVISTSPSKEAEAKDRLGADDFIVSSNPKQLQAARRSIDFILDTVSAEHSLLPILELLKVNGTLFLVGAPDKPLQLPAFPLIFGKRSVKGGIIGGIKETQEMLNVCAKYNITSDIELITPDRINEAMERLAKNDVRYRFVIDIAANSNN 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00044 359 FunFam Cinnamyl alcohol dehydrogenase 166 323 - -
Pumo9g00044 359 Gene3D - 15 353 - -
Pumo9g00044 359 CDD CAD1 14 352 IPR047109 GO:0016616
Pumo9g00044 359 FunFam probable cinnamyl alcohol dehydrogenase 15 173 - -
Pumo9g00044 359 Pfam Zinc-binding dehydrogenase 194 317 IPR013149 -
Pumo9g00044 359 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 70 84 IPR002328 GO:0008270|GO:0016491
Pumo9g00044 359 SMART PKS_ER_names_mod 19 351 IPR020843 GO:0016491
Pumo9g00044 359 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 321 IPR036291 -
Pumo9g00044 359 Gene3D - 166 323 - -
Pumo9g00044 359 SUPERFAMILY GroES-like 17 179 IPR011032 -
Pumo9g00044 359 PANTHER ALDEHYDE REDUCTASE 7 355 IPR047109 GO:0016616
Pumo9g00044 359 Pfam Alcohol dehydrogenase GroES-like domain 37 150 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00044 Pumo-Chr9 609809 613148 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00044 14 354 Monolignol Biosynthesis Gene Families AT2G21730 60.819 9.09e-149 423
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00044 K00083 - gmx:100820588 692.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00044 9 609809 613148 Pumo9g00044 9 609809 613148 ECH