Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00042 ATGGCAGCTATTTTTGCTACAGTGATGCTCATAACTATGTCCCTGGCTTCTCTTGTGAGTGCATTATTGGATGTAAATTACTACGAAAATACGTGCCCCCATGTAGAGTCCATCGTAGCTGCTGCTGTTCACAAAGCAACCATGAATGACAAAACTGTCCCAGCTGCTCTACTTCGTATGCATTTTCATGATTGCTTCATAAGGGGTTGTGATGCCTCTGTTCTTCTGGAATCAAAAGGTAAGAATAAAGCAGAAAAGGATGGACCTCCTAACATTTCATTGCATGCATTCTATGTCATTGACAACGCTAAGAAAGGAGTGGAAGCCGTTTGCCCCGGGGTCGTATCTTGTGCTGATATTTTAGTTCTTGCTGCTAGGGACGCTGTTACCCTGTCCGGAGGGCCCACTTGGGATGTACCAAAAGGAAGAAAGGATGGAAGAATATCAAAGGCCACTGAAACCAGACAATTGCCAGCTCCCACCTTCAACATCTCCCAATTACAACAAAGCTTTTCTCAAAGAGGCCTTTCCTTGGAAGATCTTGTAGCCCTCTCGGGAGGTCACACACTGGGGTTCGCTCATTGTTCATCCTTCCAGAACAGAATCCATAACTTCAGCCCCAAACAAGACATTGACCCGTCCCTGAACCCTTCATTCGCAAGCAGCCTCCGAGGCATATGCCCCTCTCACAACAAGGTTAAAAATGCAGGGACCTCATTGGATTCTAGTTCCACCTTGTTTGACAATGCTTATTACAAGTTACTCCTCCAAGGAAAGAGCATATTCTCTTCTGATCAAGCTCTCCTCACTCATCCCACCACTAAGGCTTTGGTTTCCAAGTTTGCTCATTCACAAGAAGACCATTTTGAAAGGGCCTTCGTCAAGTCCATGATCAAGATGAGCAGCCTCGCCAACGCTGGACAAGAAATCAGGCTCAATTGTAAATTCGTTAATTAG 957 0.4535 MAAIFATVMLITMSLASLVSALLDVNYYENTCPHVESIVAAAVHKATMNDKTVPAALLRMHFHDCFIRGCDASVLLESKGKNKAEKDGPPNISLHAFYVIDNAKKGVEAVCPGVVSCADILVLAARDAVTLSGGPTWDVPKGRKDGRISKATETRQLPAPTFNISQLQQSFSQRGLSLEDLVALSGGHTLGFAHCSSFQNRIHNFSPKQDIDPSLNPSFASSLRGICPSHNKVKNAGTSLDSSSTLFDNAYYKLLLQGKSIFSSDQALLTHPTTKALVSKFAHSQEDHFERAFVKSMIKMSSLANAGQEIRLNCKFVN 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00042 318 FunFam Peroxidase 26 169 - -
Pumo9g00042 318 FunFam Peroxidase 158 300 - -
Pumo9g00042 318 SUPERFAMILY Heme-dependent peroxidases 23 318 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pumo9g00042 318 CDD secretory_peroxidase 23 317 IPR033905 GO:0004601|GO:0042744
Pumo9g00042 318 ProSitePatterns Peroxidases proximal heme-ligand signature. 180 190 IPR019793 -
Pumo9g00042 318 Gene3D - 26 318 - -
Pumo9g00042 318 Pfam Peroxidase 40 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo9g00042 318 Gene3D Peroxidase, domain 2 158 300 - -
Pumo9g00042 318 PRINTS Haem peroxidase superfamily signature 180 195 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo9g00042 318 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo9g00042 318 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo9g00042 318 PRINTS Haem peroxidase superfamily signature 133 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo9g00042 318 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo9g00042 318 ProSiteProfiles Plant heme peroxidase family profile. 22 318 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo9g00042 318 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo9g00042 318 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo9g00042 318 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo9g00042 318 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo9g00042 318 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo9g00042 318 PRINTS Plant peroxidase signature 179 191 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo9g00042 318 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo9g00042 318 PRINTS Plant peroxidase signature 133 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo9g00042 318 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo9g00042 318 PANTHER PEROXIDASE 25-RELATED 15 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00042 Pumo-Chr9 575288 576732 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00042 1 317 Peroxidase AT5G42180 69.716 4.85e-171 475
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00042 K00430 - gmx:100820056 556.984