Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00036 ATGGGACTGGGGCTGTTTAAGGCTTTGTTTTGCTGCAGCAAGCCCCATGAAATTGAGATTGCCGACTCATGGGACTCCTCTCCTGAGCATTATAGTAGGCCAAAGCCACATGCACCTACTCCTCCCAAAGAAAGCAGCACCTCTACAAAAACACAGATCATAGGACCAATTCTAGGAAAACCGTACGTTGACATAAACCAGATGTACGAGATGAAGAAGGAACTAGGAAGCGGGCAGTCTGGTGTGACTTATCTGTGTGTGGAGAAGAGCACGAAGCGAGAGTATGCATGCAAATCCATTCCTCGGTCGAAGCTGTTGAGCCCGGAGGAAATAGAGGATGTGAGAAGAGAGGTTATGATTCTGCAGCATCTTTCGGGGCAACCCAACATTGTGGAATTCAGGGGGGCTTATGAGGACAATCAGCACGTGCATCTGGTGATGGAGCTGTGCAGTGGGGGCGAACTCTTCGACCGCATCATTGCCAAAGGGAACTACTCCGAGCGTGAAGCAGCCACGGTCATGAGACAGGTTGTCAATGTTGTACATGTCTGCCATTTCATGGGTGTAATGCATCGAGACCTCAAGCCAGAGAATTTCTTGTTAGCCACCAAAGATCCCAATGCAGCGGTAAAAGCCACTGATTTTGGACTCTCCGTTTTCATCGAGGAAGGTAAAGTGTATAAAGATATTGTTGGAAGTGCATACTATGTGGCTCCGGAGTTGTTAAATCGAAATTATGGAAAGGAGATAGATGTGTGGAGCGCAGGAATCATTTTATACATCCTTCTAAGTGGGGTGCCTCCATTTTGGGGCGAAACCGAGAAAAGCATATTTGAATCTATTTTGGGAGGCAAGCTTGATCTGGAGAGAGCACCATGGCCTTCAATTTCAGCTGCTGCAAAAGATTTGATCAGGAAAATGTTGAATTATGACCCTAAGAAACGCATTACAGCTGCTGAAGCCCTTGAACACCCATGGATGAAGGAAGGTGGTGAAGCATCTGACAAGCCTATTGACAATGCTGTTTTGACTAGAATGAAACAGTTCAGAGCAATGAACAAGATGAAGAAACTTGCTTTAAAGGTTATAGCAGAAAACCTTTCAGAGGAGGAAATCAAGGGGTTGAAACAAATGTTCAACAATATGGATACTGATCGCAGTGGCACAATCACATACGAGGAACTGAAATCTGGATTGACCAAATTGGGATCCAAGCTTAGTGAATCTGAAATAAAGCAGCTAATGGACGCTGCTGATGTTGACAAGAGTGGGACTATTGACTATCAAGAGTTCATCACTGCCACTATAAACCGGCATAAACTAGAGAAGGAAGAGCACTTGTATAAGGCTTTTCAATACTTTGACAAGGATAACAGCGGATATATAACAAGAGATGAGCTTAGACAAGCTTTGACAGAGTATCAAATGGGAGATGAAGCAACTATAGATGAAGTCATCGATGATGTTGACACTGATAACGATGGGAGAATTAATTACCAGGAGTTTGTGACTATGATGAGAAAGGGGATCCTGGATATTGATGAGAAAGAGAAACCACGATAA 1563 0.4415 MGLGLFKALFCCSKPHEIEIADSWDSSPEHYSRPKPHAPTPPKESSTSTKTQIIGPILGKPYVDINQMYEMKKELGSGQSGVTYLCVEKSTKREYACKSIPRSKLLSPEEIEDVRREVMILQHLSGQPNIVEFRGAYEDNQHVHLVMELCSGGELFDRIIAKGNYSEREAATVMRQVVNVVHVCHFMGVMHRDLKPENFLLATKDPNAAVKATDFGLSVFIEEGKVYKDIVGSAYYVAPELLNRNYGKEIDVWSAGIILYILLSGVPPFWGETEKSIFESILGGKLDLERAPWPSISAAAKDLIRKMLNYDPKKRITAAEALEHPWMKEGGEASDKPIDNAVLTRMKQFRAMNKMKKLALKVIAENLSEEEIKGLKQMFNNMDTDRSGTITYEELKSGLTKLGSKLSESEIKQLMDAADVDKSGTIDYQEFITATINRHKLEKEEHLYKAFQYFDKDNSGYITRDELRQALTEYQMGDEATIDEVIDDVDTDNDGRINYQEFVTMMRKGILDIDEKEKPR 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00036 520 FunFam calcium-dependent protein kinase 1 155 334 - -
Pumo9g00036 520 ProSiteProfiles EF-hand calcium-binding domain profile. 370 405 IPR002048 GO:0005509
Pumo9g00036 520 ProSitePatterns EF-hand calcium-binding domain. 490 502 IPR018247 -
Pumo9g00036 520 FunFam Calcium-dependent protein kinase 1 71 154 - -
Pumo9g00036 520 SUPERFAMILY EF-hand 366 507 IPR011992 -
Pumo9g00036 520 CDD STKc_CAMK 69 326 - -
Pumo9g00036 520 ProSiteProfiles EF-hand calcium-binding domain profile. 406 441 IPR002048 GO:0005509
Pumo9g00036 520 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672|GO:0006468
Pumo9g00036 520 Gene3D Phosphorylase Kinase; domain 1 71 154 - -
Pumo9g00036 520 ProSitePatterns Protein kinases ATP-binding region signature. 75 98 IPR017441 GO:0005524
Pumo9g00036 520 SUPERFAMILY Protein kinase-like (PK-like) 69 334 IPR011009 -
Pumo9g00036 520 ProSiteProfiles EF-hand calcium-binding domain profile. 478 512 IPR002048 GO:0005509
Pumo9g00036 520 ProSitePatterns EF-hand calcium-binding domain. 419 431 IPR018247 -
Pumo9g00036 520 ProSitePatterns EF-hand calcium-binding domain. 383 395 IPR018247 -
Pumo9g00036 520 MobiDBLite consensus disorder prediction 23 51 - -
Pumo9g00036 520 ProSitePatterns EF-hand calcium-binding domain. 455 467 IPR018247 -
Pumo9g00036 520 FunFam Calcium-dependent protein kinase 1 335 510 - -
Pumo9g00036 520 SMART serkin_6 69 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g00036 520 Gene3D Transferase(Phosphotransferase) domain 1 155 334 - -
Pumo9g00036 520 Pfam EF-hand domain pair 444 507 IPR002048 GO:0005509
Pumo9g00036 520 Pfam EF-hand domain pair 375 435 IPR002048 GO:0005509
Pumo9g00036 520 PANTHER SERINE/THREONINE-PROTEIN KINASE 64 502 - -
Pumo9g00036 520 ProSiteProfiles EF-hand calcium-binding domain profile. 442 477 IPR002048 GO:0005509
Pumo9g00036 520 SMART efh_1 446 474 IPR002048 GO:0005509
Pumo9g00036 520 SMART efh_1 481 509 IPR002048 GO:0005509
Pumo9g00036 520 SMART efh_1 374 402 IPR002048 GO:0005509
Pumo9g00036 520 SMART efh_1 410 438 IPR002048 GO:0005509
Pumo9g00036 520 Gene3D - 335 509 - -
Pumo9g00036 520 ProSiteProfiles Protein kinase domain profile. 69 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g00036 520 Pfam Protein kinase domain 69 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00036 Pumo-Chr9 509696 515258 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00036 28 509 EF-hand Containing Proteins AT4G04720 68.623 0.0 711
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pumo9g00036 Pkinase 1.3e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00036 K13412 - gmx:100816157 908.286