Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00021 ATGGAGGAGCATAAGGAAGCCGATTTGGGTGAAAAGGAGTTAGAACAAGTGGTGCGGGCTTTGCCTTCGGATGCTGTGAAGGAGTTGTTGTCCCACGGGGTATGCGCCCGCTGCATCTTTCGCCTGTTCGGCCTCCAAGGCCGCGTCTATGCTTCTCCTCCTTCCCTCTTCGCCAGCGAAACTCAACCTTGCACACTTTGCTTAGGGATCCTGCAGTTCACATACTCTAATGTTAAAAACGACAATCTCCCACTTCTCATTGCTGACATGGTTAAACAACAAGCCTATCACTTCGATACCTTTTCCCTTGAAGTTTCCATCCCACCTATCATTCTCGATAATGATAATTCTCTTCGCTCGTGCTCGTACATGAAAACCAAATATGGATCTCAACCTTGGTTCCAAGATATTGGATGCATCTCTACAAAGGACGCCTTAAAATTTTCTCTAATCTATCCTCTTGAAAATCTTCTGGAATGTAAATCAAGCATGGGCCCTTTCCGCATTCGTTTAACATACACTCACCACACTAAAGCATCAAAAGGGGATGACAAATGTTCCGATACTGCTGAGACTTGCAAGAGAAGAAAAGTAGGTGAGTCCTGTATAGTTGGAGAAAGATCTTTTAGCAGTTCACTCGAAAATGATTCCTCTGACTGCTGTAAATTCTTGCTAGACAAGGCAAATGAGCCTTGCCATTTTACTTACTGTTGCTACAGGACGCCTTTCTATTTTGGTGGAAGATACCTAAAGTATTCACGGAATGTGAGTCAAACACGCTGGATCATTGATGATGAAAGAATGGGAGAAGCATCGGTTGAGGAAATAATTGGTGGAAACATCCTCCAAGCCTGCCAAGGTGATAGTTTTAAGTTTCATGCTGCAGGCAGAGAAGATATCGATGTCCGGATGTTGGGTCCAGGCAGGCCATTTCTTGTTGAGGTGCAAAATGGACGACATATCCCATCTGAACTGTTTGTAAAAGATATAATGAAAACGATAAATAGCTTGGAGAATAAATTGGTTAGGGTGAAAAATCTGAAACTTGTTGGTAGTGATGGCTGGAACCTTATGCGTGAAGGTGAAGCAGAGAAGCAGAAACAATATGCTGCTTTAGTGTGGATTTCTCGTCCTCTAAAGGATGAAGATTTTCAATGTGTTTCTTCACTCAAGGATTTGAAAGTTTTGCAGAGGACTCCAATAAGGGTGCTACATCGCCGCAGTCCTTTAGAGCGGGAAAAGATTATTCATTGGATGAAAATAGAGACAATTGCTGGAAGCTCCCAATATTTTCTTTTGCACCTATGTACACAGGCTGGGACCTACATCAAGGAATTTGTTCATGGGGATCTTGGACGCACCCATCCTAGCATTGGATCAATTTTGGGATGCAGAGCTGAAATTTTGCAACTTGATGTCACAGACATCAAAATGGAATGTTTCCTGACATAA 1452 0.4291 MEEHKEADLGEKELEQVVRALPSDAVKELLSHGVCARCIFRLFGLQGRVYASPPSLFASETQPCTLCLGILQFTYSNVKNDNLPLLIADMVKQQAYHFDTFSLEVSIPPIILDNDNSLRSCSYMKTKYGSQPWFQDIGCISTKDALKFSLIYPLENLLECKSSMGPFRIRLTYTHHTKASKGDDKCSDTAETCKRRKVGESCIVGERSFSSSLENDSSDCCKFLLDKANEPCHFTYCCYRTPFYFGGRYLKYSRNVSQTRWIIDDERMGEASVEEIIGGNILQACQGDSFKFHAAGREDIDVRMLGPGRPFLVEVQNGRHIPSELFVKDIMKTINSLENKLVRVKNLKLVGSDGWNLMREGEAEKQKQYAALVWISRPLKDEDFQCVSSLKDLKVLQRTPIRVLHRRSPLEREKIIHWMKIETIAGSSQYFLLHLCTQAGTYIKEFVHGDLGRTHPSIGSILGCRAEILQLDVTDIKMECFLT 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00021 483 NCBIfam tRNA pseudouridine(54/55) synthase Pus10 240 477 - -
Pumo9g00021 483 FunFam tRNA pseudouridine synthase Pus10 242 366 - -
Pumo9g00021 483 Gene3D - 243 366 - -
Pumo9g00021 483 PANTHER UNCHARACTERIZED 59 480 IPR039894 -
Pumo9g00021 483 Gene3D - 367 477 - -
Pumo9g00021 483 Coils Coil 327 347 - -
Pumo9g00021 483 SUPERFAMILY Pseudouridine synthase 363 477 IPR020103 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Pumo9g00021 483 FunFam tRNA pseudouridine synthase Pus10 367 477 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00021 K07583 - gmx:100780683 860.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00021 9 370414 376095 Pumo9g00021 9 370414 376095 ECH