Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00017 ATGGCAAGGAAGTGGCAAAGAATGAAACGGAGAGAGATGAGGCATCATAAGGTAGCAGATAAAGGTCACTTTGTGGTGTACACCGTTGACAAGGGACGTTTCGTGGTACCATTGACTTATTTGAGGAACAACATATTCAGAGAGCTGTTCAGGATGTCTGAGGAACTCTTCGGGCTCCCAACTGACGGTCCAATTATATTGCCCTGTGACGCACCCTTCATGGAATACGTTTTGTCGTTGGTTCGGAAACACGCCTCTTTGGAGCTTCAGAACGCAGTGCAGATACTAGCATCTTTTGCCTTAATTTGA 309 0.4595 MARKWQRMKRREMRHHKVADKGHFVVYTVDKGRFVVPLTYLRNNIFRELFRMSEELFGLPTDGPIILPCDAPFMEYVLSLVRKHASLELQNAVQILASFALI 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00017 102 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 1 94 IPR003676 GO:0009733
Pumo9g00017 102 Pfam Auxin responsive protein 6 80 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00017 Pumo-Chr9 321520 321828 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00017 1 86 Calmodulin-binding Proteins AT4G34750 30.000 6.85e-08 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00017 - - lang:109352902 144.436