Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00009 ATGAGCTGCTTTTGTTCTCGTACTCGTGGGAAGGATGTGAGCGTCGTTGAAAATCTAGGGTCAAATAAGCCCAAGAAAGCCTCAGCCACGAGTTTCAGTTTTCGCGAGCTTGCATCGGCAGCGAGGGGCTTTAAGGAAGTGAATTTGATTGGGGAAGGAGGTTTTGGAAAGGTTTACAAGGGTCGTCTCTCTACAGGCCAGCTTGTTGCTATAAAACAATTACGTCTTGATGGTGAAAGTCATCAAGGTAATCGGGAATTTGTCACCGAGGTTCTTATGTTAAGCCTCCTACACCATTCTAATCTTGTTAAATTAATTGGCTACTGCACCCATGGAGATCAAAGGCTTTTGGTTTATGAGTACATGCCAATGGGAAGCCTCGAACAGCACCTTTTCGGTATATATGTATCTCGCCCATTTTTTAGTGACCGGAGAAAGCTTTCGCAAATCGTTGACCCTCGTTTGGAAGGAAACTACCCCTTGCGTTGTTTGCACAATGCAATTGCTATTACTGCAATGTGCCTCCAGGAGCAACCAAATCTTCGTCCATCCATCGGTGATATTGTCGCTGCACTGGAGTACTTGGCCTCTGAAAGTGTTTCTGAAGTCATTAGGCAACCACAATCAGAATCAGAAACTGAAACAGAAACAGATAGAAACTAG 663 0.4449 MSCFCSRTRGKDVSVVENLGSNKPKKASATSFSFRELASAARGFKEVNLIGEGGFGKVYKGRLSTGQLVAIKQLRLDGESHQGNREFVTEVLMLSLLHHSNLVKLIGYCTHGDQRLLVYEYMPMGSLEQHLFGIYVSRPFFSDRRKLSQIVDPRLEGNYPLRCLHNAIAITAMCLQEQPNLRPSIGDIVAALEYLASESVSEVIRQPQSESETETETDRN 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00009 220 Gene3D Phosphorylase Kinase; domain 1 8 119 - -
Pumo9g00009 220 ProSitePatterns Protein kinases ATP-binding region signature. 50 72 IPR017441 GO:0005524
Pumo9g00009 220 Gene3D Transferase(Phosphotransferase) domain 1 120 218 - -
Pumo9g00009 220 FunFam Serine/threonine-protein kinase CDL1-like 16 121 - -
Pumo9g00009 220 PANTHER OS07G0668900 PROTEIN 137 202 - -
Pumo9g00009 220 ProSiteProfiles Protein kinase domain profile. 44 220 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g00009 220 Pfam Protein kinase domain 44 131 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g00009 220 SUPERFAMILY Protein kinase-like (PK-like) 24 136 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00009 Pumo-Chr9 231869 233115 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00009 128 216 Glycoside Hydrolase AT3G07070 36.170 2.00e-13 66.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Pumo9g00009 Pkinase 4.9e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00009 - - gmx:100794722 226.098