Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00004 ATGGTTTCGCTTCATCCACTAGTGTGTCCTTTGTCAGTCTCCTCTTCATCCTCCGGTTTTCTCAGATGCTCCCTCTGGTGTCGCCGCATCCGCTCCCCGAAACGAAGAAGCAACTTCATTACTGCTTCGTGGCAAGAGCTCGCTGGAGTTTTACTATTCTCAGCGATTCCTTTCACTGCCGTGAAAGCTATAGCTAATAGTTCGCTAGGGGAGTCGCTTCAGAGGAAAATGGAGGAGACAAAGAAATTTGCTGTGGAAAACTCGTCTAAATTCAAGGCCTTAGCCCACGAGGCCCGAAAGGAGAGCTTTTGGTATGGAGAAGATCGGCCTCGTTGGCTTGGTCCTATTTCATATGAATACCCATCACATCTTACTGGGGAACTGCCCGGGGATTACGGCTTTGATATTGCTGGGCTTGGCAAGGACCCTGTGGCACTGCAGAAATACTTCAACTTTGAGATATTGCATGCTCGGTGGGCCATGCTTGCATCTGTCGGAGCTCTGATTCCTGAAATATTAGACCTATTGGGAGCCTTTCACTTTGTAGAACCTGTGTGGTGGCGTGTTGGTTATTCAAAGCTTAAGGGAGATACTCTAGATTACCTTGGCATCCAAGGTCTTCACTTTGCTGGAAGTCAGGGAGTGGTCGTGATTGCTATTTGCCAAGCACTCCTTATGGTTGGACCGGAATACGCTAGATATTGTGGGATTGAGGCATTGGAGCCTCTAGGAATATATCTGCCTGGTGATATAAATTATCCTGGAGGAGCTTTGTTTGATCCCTTGAATCTGTCCAATGATCCTGAAGCTTTTGAAGAGCTGAAGGTAAAAGAAATAAAAAATGGACGCTTGGCAATGGTTGCCTGGTTAGGCTTTTACGTGCAAGCAGCACTGACGGGCAAAGGTCCTGTACAAAACCTTATTGATCACATCTCCGATCCTTTCCACAACAACTTGCTGGGCTCCCTCAACTTCATGAAAGTAGTCATGTAA 993 0.4693 MVSLHPLVCPLSVSSSSSGFLRCSLWCRRIRSPKRRSNFITASWQELAGVLLFSAIPFTAVKAIANSSLGESLQRKMEETKKFAVENSSKFKALAHEARKESFWYGEDRPRWLGPISYEYPSHLTGELPGDYGFDIAGLGKDPVALQKYFNFEILHARWAMLASVGALIPEILDLLGAFHFVEPVWWRVGYSKLKGDTLDYLGIQGLHFAGSQGVVVIAICQALLMVGPEYARYCGIEALEPLGIYLPGDINYPGGALFDPLNLSNDPEAFEELKVKEIKNGRLAMVAWLGFYVQAALTGKGPVQNLIDHISDPFHNNLLGSLNFMKVVM 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00004 330 FunFam Chlorophyll a-b binding protein, chloroplastic 111 323 - -
Pumo9g00004 330 Gene3D Chlorophyll a/b binding protein domain 111 322 - -
Pumo9g00004 330 SUPERFAMILY Chlorophyll a-b binding protein 103 321 - -
Pumo9g00004 330 Pfam Chlorophyll A-B binding protein 121 296 IPR022796 -
Pumo9g00004 330 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 81 320 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00004 Pumo-Chr9 147133 152278 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00004 29 324 Chloroplast and Mitochondria Gene Families AT1G76570 79.054 1.29e-176 490
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00004 K14172 - gmx:100786260 592.038