Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo99g00010 ATGTCTTGGTTTTCCAATGCTTATAGAATCAAGTACCTTCCAGGTATGAGTAAGTATTGGGCAATGGCTGCATCACACCATCGCTTAGCTTGGATTCATCCATTCTTAGATGGCAATGGTCGAGTTTCAAGGTTATTTACTGATTGTTTTATGCGTGCAATCGGTTTGAAAAGTTATGGCTTGTGGTCCATGTCTAGAGGGTTTGCCCGTTCGAGTGAGCAATATTATAAGTACCTTGCTATTGCTGATAGACAAAGACAAGCCGAAGTTTCAGATTTATCTGAAGATATGCGTTTAATTCTAGATGCAGGCACAAAACGACTTGTCGCTAAAATTGCGCACTTATTAGAACAAGGCACTCAAGAAGGTTCGATTCACATTCAAGCTCAAGCCTCAGATGTTGCCCAAGTAATCTACCAAATGTGGTTAGGTCATAAAACAGGATTTTGGTTAGAAGAGTTTACTGCTCCGTATTATGTATTTAAAGATGCTGGCGCAAACATTACCCTTGCCTCTCCTAAAGGTGGACAACCACCGCTTGATCCTAAAAGTAATGAAGCAGATTTTCAAACTGAAACAACTCGACGTTTTGAGCAAGATCAAGGATCAAAAGCACAACTAGCGCAAACTAAAAAGCTCTCTGAAATCAATGTCGCTGAATTTGATGCAGTATTTTTCCCAGGTGGACATGGTCCTTTGTGGGATTTAGTTAATGATCCATATGCGATTGCTTTAATGGAACAAGTCATTGCGGATCAGAAACCATTGGGCGTTGTCTGCCATGCCAGTGCGGTCGTTAAAAATGTAAAAACACCTGAAGGACAGCCATTTGCTCAAGGTAAACAAATTACAGGTTTTTCAAACAGCGAAGAAGAAGCAGTTCAACTCACTGATATTGTGCCATTTTTACTTGAAGATGAGCTTAAAGCGCAAGTCAAGGAAATAAATATGGCTCAGCAAAATCTACATCAGATTATTGATGAAATGCGTCAAGCACATCTTCAAGAGGGATTTCCTCTCGCAGATTTACGTATAGATCGCCTTGAACGTGCTAAAAAATTATTACTTGAAAATAGAGATCAGTTATTAGTAGCGATCAGTGCAGATTTCGGACATCGTAATGATTTTCAAGGGCTGGCAACCGATGTTTTAGCATCAGTCGCGTTATTGGACGATGCAAAACAACAGTTAAGCGAATGGATGAAAAGTGAAGTTGTTAGTAATCCATTTGATGGCATGAAAACCGAAATTCAATATCAGCCTTTAGGAGTAGTCGGTATTATTAGTCCGTGGAATTTCCCTTTAAATTTGGCATTTGGTCCATTGGCAGGTGTTTTTGCTGCGGGAAATCGTGCAGTCATAAAACCATCAGAACTTACACCACGAACCAGTGATTTGTTGGCGCAACTTGTGCCGCAGTATTTTGATGCAAATGAATTACGTGTCGTCACTGGCAATGCAGAGATTGGTGCAGCATTCAGTACCTTAGCGTTTGATCATTTGATTTTTACGGGCAGTACCAATGTCGGTAAACAGGTGATGCGTGCCGCAGCAGAAAATTTAGTTCCTGTTACGTTAGAATTGGGTGGTAAATCGCCTGTTGTTTTAACTGAGCATTTTGATTTAAAAACTGCGGTAGAACGTGTACTGACAGTGAAAACATTTAATGCAGGACAAATTTGTATTTCGCCTGATTATGTGATGATGCCTGAAGCATTCAATACTGCATTTATTGAGCATGCACAAAACTTTCTGCAAGATATTTACGGTGCACGTTTCTTTGCCAATGATGATTTCACCTCAATCATTAGCGATAAACATTTTGCACGCTTACAGCACTTGCTTGAGGATGCCAAAGCAAAAGGCGCAACGCTAGTAACACTTGGGCAAGAGTCTGAAATCAGTGATCAAACTACACGTAAGATTGTACCAACGCTGGTTTTTGGTGTGACTGATGACATGCTGATAATGCAAGAAGAAATATTTGGACCATTGCTTCCAATCAAAAACATTCAGTCTGTTGATGATGCCATTGCTTATATCAATGCACATCCACGCCCATTAGCAGCTTATTATTTTGATGATCGTGCTGATCAACAACAATATTTTGCAGAAAAAACGGTCTCGGGTGGTCTCGTTATTAACGATGTCATGACACATGTCGTTATTGATACTTTACCGTTTGGTGGCGTTGGGGCTTCGGCAACAGGTGGTCGTGCAGGACGTACTCAACTTGATGATGGAACGTTGGCTTTAGATTTAGCTGTTCCAGGTTCAGGTAAAGAAGGTGCAAACCCTGAGCAACTTTTTGCTTTGGGGTATGCCGCTTGTTTTGATAATGCATTACCCTTTGCAGCAAAACAGCTTGAAGTAGAATATTCATCAAGCAAAACTTCAGTGGAAGTTGGCATTGAATTTGGCGAGCCTGAAATTGTACTCAGTTCTCAAGATCAGCCTATACCTGAACCTACTGACGATGAAGTCCGCATTAAAACGATTTTAACCCCTATTCACAACCATGATATTTGGACAGTCCGTGGTCGTTATGGCTATAAACCAACATTCCCTGCAATTGGTGGGAGTGAAGCAGTCGGAATAATTGATGCGGTGGGTACAAATGTTTCTCATGTCCATGTTGGACAACGTATTGCTGTTGCATCAGTACATGGCACATGGGCGGAATATTTTATTGCCCCTGCACGATCCGTGATTCCATTGCCTGATGCTATTTCGAATGAAATTGCAGCGCAATTGATTGCAATGCCATTAAGTTCAGCAATGCTTTTAGACTTTTTGCAAGTAAAACAAGGCGATTGGCTCATCCAAAACGCGGCAAGCGGTGCTGTCGGTAAAACTTTAGCCATGCTTGCCGAAGCACGTGGTATTCATTCAATTAGCTTAGTACGCCGTGATAGTGCAATTGCAGAATTGAAAGAATTGGGCATTCAGCATGTAGTTTCAACCGAACAGGCAGATTGGAAAGATCAAGTTAAAGCTATTGTCGTTGATCAACTTATTATTGCAGCCGTCGATTCTATTGGTGGGACAGCAAGTACAGATCTACTTGAGTTGCTTGGAGAAAATGGCACATTGGTTTCATTCGGAACGATGAAAGGCGAACCAATGCAAATTCCATCAGGCGATATGATTTTTAAACAAATTGTCGTTAAAGGTTTTTGGGGTTCTAAAGTCAGTCGTGATCTGTCAAGTGAAGACAAAAAACGACTCGTTACTGAACTCATTCAAGGTGTGTTAAATAATACGTTGAAACTGCCTGTTGAAGCGATTTACTCATTAGATGACATTAAAGATGCAAGTCTAGCAAGCCTGAAAAAAGGTAAAAAGGGTAAAGTTTTGCTGAAACCCTAA 3369 0.4081 MSWFSNAYRIKYLPGMSKYWAMAASHHRLAWIHPFLDGNGRVSRLFTDCFMRAIGLKSYGLWSMSRGFARSSEQYYKYLAIADRQRQAEVSDLSEDMRLILDAGTKRLVAKIAHLLEQGTQEGSIHIQAQASDVAQVIYQMWLGHKTGFWLEEFTAPYYVFKDAGANITLASPKGGQPPLDPKSNEADFQTETTRRFEQDQGSKAQLAQTKKLSEINVAEFDAVFFPGGHGPLWDLVNDPYAIALMEQVIADQKPLGVVCHASAVVKNVKTPEGQPFAQGKQITGFSNSEEEAVQLTDIVPFLLEDELKAQVKEINMAQQNLHQIIDEMRQAHLQEGFPLADLRIDRLERAKKLLLENRDQLLVAISADFGHRNDFQGLATDVLASVALLDDAKQQLSEWMKSEVVSNPFDGMKTEIQYQPLGVVGIISPWNFPLNLAFGPLAGVFAAGNRAVIKPSELTPRTSDLLAQLVPQYFDANELRVVTGNAEIGAAFSTLAFDHLIFTGSTNVGKQVMRAAAENLVPVTLELGGKSPVVLTEHFDLKTAVERVLTVKTFNAGQICISPDYVMMPEAFNTAFIEHAQNFLQDIYGARFFANDDFTSIISDKHFARLQHLLEDAKAKGATLVTLGQESEISDQTTRKIVPTLVFGVTDDMLIMQEEIFGPLLPIKNIQSVDDAIAYINAHPRPLAAYYFDDRADQQQYFAEKTVSGGLVINDVMTHVVIDTLPFGGVGASATGGRAGRTQLDDGTLALDLAVPGSGKEGANPEQLFALGYAACFDNALPFAAKQLEVEYSSSKTSVEVGIEFGEPEIVLSSQDQPIPEPTDDEVRIKTILTPIHNHDIWTVRGRYGYKPTFPAIGGSEAVGIIDAVGTNVSHVHVGQRIAVASVHGTWAEYFIAPARSVIPLPDAISNEIAAQLIAMPLSSAMLLDFLQVKQGDWLIQNAASGAVGKTLAMLAEARGIHSISLVRRDSAIAELKELGIQHVVSTEQADWKDQVKAIVVDQLIIAAVDSIGGTASTDLLELLGENGTLVSFGTMKGEPMQIPSGDMIFKQIVVKGFWGSKVSRDLSSEDKKRLVTELIQGVLNNTLKLPVEAIYSLDDIKDASLASLKKGKKGKVLLKP 1122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo99g00010 1122 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 911 1084 IPR036291 -
Pumo99g00010 1122 Pfam Zinc-binding dehydrogenase 948 1068 IPR013149 -
Pumo99g00010 1122 Pfam Aldehyde dehydrogenase family 319 746 IPR015590 GO:0016491
Pumo99g00010 1122 SUPERFAMILY ALDH-like 322 741 IPR016161 GO:0016491
Pumo99g00010 1122 Gene3D - 823 1122 - -
Pumo99g00010 1122 CDD ALDH_CALDH_CalB 323 741 - -
Pumo99g00010 1122 Pfam Alcohol dehydrogenase GroES-like domain 826 886 IPR013154 -
Pumo99g00010 1122 SUPERFAMILY Class I glutamine amidotransferase-like 142 310 IPR029062 -
Pumo99g00010 1122 Gene3D - 765 822 IPR015946 -
Pumo99g00010 1122 Pfam DJ-1/PfpI family 151 270 IPR002818 -
Pumo99g00010 1122 ProSiteProfiles Fido domain profile. 1 102 IPR003812 -
Pumo99g00010 1122 Coils Coil 308 335 - -
Pumo99g00010 1122 Pfam Fic/DOC family 20 50 IPR003812 -
Pumo99g00010 1122 SUPERFAMILY Tetracyclin repressor-like, C-terminal domain 88 147 IPR036271 -
Pumo99g00010 1122 Gene3D - 134 328 IPR029062 -
Pumo99g00010 1122 PANTHER ALDEHYDE DEHYDROGENASE 319 746 IPR012394 GO:0006081
Pumo99g00010 1122 SUPERFAMILY Fic-like 14 99 IPR036597 -
Pumo99g00010 1122 CDD ETR_like_2 806 1109 - -
Pumo99g00010 1122 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 530 734 IPR016163 GO:0016620
Pumo99g00010 1122 SUPERFAMILY GroES-like 805 941 IPR011032 -
Pumo99g00010 1122 FunFam Aldehyde dehydrogenase 530 734 - -
Pumo99g00010 1122 Gene3D - 921 1065 - -
Pumo99g00010 1122 Coils Coil 345 365 - -
Pumo99g00010 1122 Gene3D - 1 121 IPR036597 -
Pumo99g00010 1122 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 342 746 IPR016162 GO:0016491
Pumo99g00010 1122 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 526 533 IPR029510 GO:0016491
Pumo99g00010 1122 CDD GATase1_Hsp31_like 144 311 - -
Pumo99g00010 1122 SMART PKS_ER_names_mod 807 1120 IPR020843 GO:0016491
Pumo99g00010 1122 SUPERFAMILY OsmC-like 733 811 IPR036102 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo99g00010 393 746 Aldehyde Dehydrogenase Gene Family AT1G44170 40.056 6.87e-81 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo99g00010 K00154 - bgj:AWC36_13745 506.523