Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo99g00005 ATGCAAAATGTACAGTTACTTATTCACGGTCAATCGGTTGATGCATCAAATCAGGCTACTTTTGAACGTATTAGTCCCATTGATGGATCGGTGGCAAGCAAAGCTGCTGCTGCAACTTTGGAAGATGTTGATCGTGCAATTGATTCGGCACAACACGCTTTTAAAGTATGGTCGAAGCTTTCACCGACCGAACGTCGTTTACGTTTGTTAAAAGCAGCCGATTTAATGGACCAAAAGACCGAGCAATTCATTGAAATCGGAATGCAGGAAACAGGTTCAACTGCAACATGGTATGGGTTTAACGTTCACCTTGCTGCGAATATGTTACGTGAAGCCGCAGCGATGACCACACAAATTGACGGAAGCCTGATTCCGTCAGATATATCTGGTAATCTCGCCATGGGTATGCGTGTTCCTTGTGGGGTTATCGTAGGCATTGCACCTTGGAACGCCCCTATCATTTTGGCAACACGTGCGCTTGCCATGCCATTGGCTTGTGGCAATACCGTTGTGTTAAAAGCATCCGAAGCTTGTCCAGCAACGCATCGTCTGATTGGTGAAGTGTTACACGAAGCGGGTCTTGGCGAAGGCGTGATGAATGTGATTACCCATGCCGCCGAAGATGCCCCACAAATTGTGGAGCGCTTGGTGTCTCATCCAGCTGTGAAGCGCATTAATTTTACTGGCTCAACTAAAGTCGGAAAAATTATTGCCGAGACTGCTGCCAAATATTTAAAACCTGTTTTACTCGAACTTGGCGGCAAAGCCCCTGTTGTAATTTTAAATGACGCAAATATTGAAGAAGCCGTAAATGCTGTCACTTTTGGAGCGTTCTTTAATCAGGGGCAAATTTGTATGTCGACTGAACGTGTTTTGGTTCAAGACAAAATTGCCGACCAGTTTATTGAAAAACTGATTGAGAAAACTCGCTCTATTCAGGCGGGTAATCCGACTTCAAAAGAAAATGCACTTGGTGTTTTAGAAAGCCGCCGTGCCGCAAACCGTATTCAGCATTTATTAGAAGATGCCCAAAACAAAGGTGCCGACTTACCGTTAGGCATTCATATTGAAGACACCACCATGCAACCGACGCTGGTGCTCAATATTAAACCCGACATGCTGCTTTACCGCGAAGAATCGTTTGGACCTGTCTGCACCGTACAACGTTTTTCAACCGTTGAAGAAGGCATAGCACTGGCAAATGACAGCGAGTTCGGTCTTTCTTCAGCAGTGTTTAGTCAGAATATTTCGCAGGCATTGGAAGTTGCGAAACAGATTGATTCGGGTATTTGTCATATTAACGGTGCAACCGTGCATGACGAAGCTCAAATGCCATTTGGCGGAACAAAATCGAGTGGTTATGGACGATTTGGTAGTAAAGCGTCTATTGGTGAATTTACCGAATTGCGTTGGATCACCATTCAGACCCAATCACGTCATTACCCGATTTAG 1452 0.4497 MQNVQLLIHGQSVDASNQATFERISPIDGSVASKAAAATLEDVDRAIDSAQHAFKVWSKLSPTERRLRLLKAADLMDQKTEQFIEIGMQETGSTATWYGFNVHLAANMLREAAAMTTQIDGSLIPSDISGNLAMGMRVPCGVIVGIAPWNAPIILATRALAMPLACGNTVVLKASEACPATHRLIGEVLHEAGLGEGVMNVITHAAEDAPQIVERLVSHPAVKRINFTGSTKVGKIIAETAAKYLKPVLLELGGKAPVVILNDANIEEAVNAVTFGAFFNQGQICMSTERVLVQDKIADQFIEKLIEKTRSIQAGNPTSKENALGVLESRRAANRIQHLLEDAQNKGADLPLGIHIEDTTMQPTLVLNIKPDMLLYREESFGPVCTVQRFSTVEEGIALANDSEFGLSSAVFSQNISQALEVAKQIDSGICHINGATVHDEAQMPFGGTKSSGYGRFGSKASIGEFTELRWITIQTQSRHYPI 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo99g00005 483 FunFam Gamma-aminobutyraldehyde dehydrogenase 254 442 - -
Pumo99g00005 483 SUPERFAMILY ALDH-like 2 477 IPR016161 GO:0016491
Pumo99g00005 483 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 250 257 IPR029510 GO:0016491
Pumo99g00005 483 PANTHER BENZALDEHYDE DEHYDROGENASE YFMT 4 483 - -
Pumo99g00005 483 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 1 253 IPR016162 GO:0016491
Pumo99g00005 483 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 254 483 IPR016163 GO:0016620
Pumo99g00005 483 CDD ALDH_SaliADH 42 474 - -
Pumo99g00005 483 FunFam NAD/NADP-dependent betaine aldehyde dehydrogenase 8 281 - -
Pumo99g00005 483 Pfam Aldehyde dehydrogenase family 16 472 IPR015590 GO:0016491
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo99g00005 1 470 Aldehyde Dehydrogenase Gene Family AT3G48000 35.052 9.64e-87 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo99g00005 K21802 - acb:A1S_1110 912.909