Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo97g00002 ATGAAAAGCAATCTAGAAAGAGATACAAGTGTAATAAGTGAGTACGAGAAGGAAGATACAGAGTTGCCTGTGTTTGATTTGTCTACAATTAGTTCTGCGACAAATAACTTTTCGCCTGACAACAAACTAGGGGAAGGAGGTTTTGGATCAGTTTATAAGAAGAGCATGTTACTAGATTGGCCAAGGCGCTTGCTCATTATCAATGGGATTGCTCGGGGTCTTCTTTATCTTCATCAAGATTCAAGGCATAGAATAGTTCATAGAGATCTCAAAGCTGGGAATGTTTTGTTAGACAGTGAAATGAACCCAAAAATCTCCGACTTTGGATTGGCCAGAAGCTTTGGAGGAAATGAAACTGAAGCAAACACAAAGCATGTAGTTGGAACCTATGGCTATCTGCCGCCAGAGTATATAATTGGTGGAGTTTATTCAACAAAGTCGGATGTTTTCAGCTTTGGTGTGTTAATATTGGAGATAGTGAGTGGGAAGAGAAATAGAGGATTCTGTCATCAAGATAATCTTCTGGCACATGCATGGAGACTATTTACTGAAGGCAAATGCCCTGAAATAGTTGATGCAACAATAAGAGACTCACTCAATTTATCTGCAGCGATTAGATTAATTCATGTGGGACTACTCTGTGTGCAACTAAGTCCAGACGACAGGCCAAGCATGTCCTCTGTGGTCCTGATGCTGAGCAGTGAATCTGCATTGCCTCAGCCAAAATTGCCTGGATTCTTTACAAATTGGAATCTGGTTGGGGACTGTTCTTCATCAAGCAATTATAAACAATACTCAAATAATGACATGACAGTTAGCATAATGTCTGCTCGATAG 837 0.4014 MKSNLERDTSVISEYEKEDTELPVFDLSTISSATNNFSPDNKLGEGGFGSVYKKSMLLDWPRRLLIINGIARGLLYLHQDSRHRIVHRDLKAGNVLLDSEMNPKISDFGLARSFGGNETEANTKHVVGTYGYLPPEYIIGGVYSTKSDVFSFGVLILEIVSGKRNRGFCHQDNLLAHAWRLFTEGKCPEIVDATIRDSLNLSAAIRLIHVGLLCVQLSPDDRPSMSSVVLMLSSESALPQPKLPGFFTNWNLVGDCSSSSNYKQYSNNDMTVSIMSAR 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo97g00002 278 Gene3D Phosphorylase Kinase; domain 1 11 54 - -
Pumo97g00002 278 ProSiteProfiles Protein kinase domain profile. 1 243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo97g00002 278 Pfam Domain of unknown function (DUF3403) 233 278 IPR021820 GO:0004674
Pumo97g00002 278 Pfam Protein kinase domain 66 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo97g00002 278 Gene3D Transferase(Phosphotransferase) domain 1 55 236 - -
Pumo97g00002 278 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 15 53 - -
Pumo97g00002 278 SUPERFAMILY Protein kinase-like (PK-like) 19 247 IPR011009 -
Pumo97g00002 278 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 48 240 - -
Pumo97g00002 278 SMART serkin_6 37 232 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo97g00002 278 ProSitePatterns Serine/Threonine protein kinases active-site signature. 85 97 IPR008271 GO:0004672|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo97g00002 25 247 Receptor kinase-like Gene Family AT4G23280 51.793 7.32e-83 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo97g00002 Pkinase 2.8e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo97g00002 - - gmx:100795006 395.201