Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo97g00001 ATGACAAAAAATTCCAAAGCAATCTCCCTCTCCCAAATCTCTCTCTCCTTTGACTCGAACTTCGCATCCTCCCGGGACCACCACCCTAGCTCCTCTTCCCAAGGCCATCCACCACCACCTGCCACTGCCAATCAGCCTCTTGTGACCCCACCCACCAACAAGCCACATGGTAGGCCCCTAGGCTCTAGGAACAAGCCAAAGTCCACCTGCCTCTCAGTGGCTCAGCCCACCGAGCCCTCTGTGAAGCTTGTCAAGATCGATGTAGCTCCAGGCAGGGACGTCATCGAGACCATCCTTAACGTTGCTCGTCAGAGACACATCAGCCTCACCGTCGTTAATGCCTCTGGCACGATCGACAGCGTAACCCTTCGCAGCTCACCCCACGGTGGCACCACCTTCATGCTCCATGGCCCCTTCACCTTGTTGTCCCTCACTGGCTTCTACGTATACAACAACCACTACACCCTTCACCTTGGAGCCACCCCTCCCCCTCCATTATATTTCGGGATCAAGCTTTCCACCTATGATGGACAGGTCTTCAGCGGCCCTATTGGTGGCAGAGTCGTTTCTGGTGACGACGTCAGCGTCATGGTCTCCACCTTCAAGAACCCCGAAATTTACAATCACATTCCTGAAGGTGAAGTAGGGGACAACAATGGCAACAACAATAATAACAATAATCCTAGTGATGAGTGA 696 0.533 MTKNSKAISLSQISLSFDSNFASSRDHHPSSSSQGHPPPPATANQPLVTPPTNKPHGRPLGSRNKPKSTCLSVAQPTEPSVKLVKIDVAPGRDVIETILNVARQRHISLTVVNASGTIDSVTLRSSPHGGTTFMLHGPFTLLSLTGFYVYNNHYTLHLGATPPPPLYFGIKLSTYDGQVFSGPIGGRVVSGDDVSVMVSTFKNPEIYNHIPEGEVGDNNGNNNNNNNPSDE 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo97g00001 231 CDD DUF296 88 201 IPR005175 -
Pumo97g00001 231 Pfam Plants and Prokaryotes Conserved (PCC) domain 86 203 IPR005175 -
Pumo97g00001 231 ProSiteProfiles PPC domain profile profile. 78 223 IPR005175 -
Pumo97g00001 231 MobiDBLite consensus disorder prediction 208 231 - -
Pumo97g00001 231 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 33 222 IPR014476 GO:0003680
Pumo97g00001 231 MobiDBLite consensus disorder prediction 215 231 - -
Pumo97g00001 231 FunFam AT-hook motif nuclear-localized protein 17 80 217 - -
Pumo97g00001 231 Gene3D - 81 217 - -
Pumo97g00001 231 SUPERFAMILY AF0104/ALDC/Ptd012-like 84 205 - -
Pumo97g00001 231 MobiDBLite consensus disorder prediction 19 74 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo97g00001 53 214 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 32.948 2.27e-20 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo97g00001 - - gmx:100818645 239.965